Factsheet for Bra025800.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033068.1-P	Field mustard	cytosol	69.84	46.32
Bra016473.1-P	Field mustard	extracellular	95.24	35.29
HORVU1Hr1G036910.1	Barley	extracellular	63.49	32.52
Bra000142.1-P	Field mustard	extracellular	73.02	27.88
TraesCS7B01G293800.1	Wheat	extracellular	58.73	18.41
Bra023523.1-P	Field mustard	cytosol	53.97	14.53
Bra033099.1-P	Field mustard	extracellular	55.56	14.23
Bra025397.1-P	Field mustard	extracellular	55.56	14.06
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	52.38	13.75
KXG32172	Sorghum	extracellular	57.14	13.58
Bra027249.1-P	Field mustard	cytosol, extracellular, plastid	49.21	13.48
Bra026965.1-P	Field mustard	extracellular	55.56	13.31
Bra019775.1-P	Field mustard	extracellular	55.56	13.31
Bra016767.1-P	Field mustard	extracellular	55.56	13.31
Bra030353.1-P	Field mustard	extracellular	50.79	12.55
Bra001593.1-P	Field mustard	extracellular	49.21	12.35
Bra028232.1-P	Field mustard	extracellular	49.21	11.4

Protein Annotations

EnsemblPlants:Bra025800.1	EnsemblPlants:Bra025800.1-P	EnsemblPlantsGene:Bra025800	Gene3D:2.40.40.10	GO:GO:0005575	GO:GO:0005576
InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:IPR007112	InterPro:IPR036908	InterPro:RlpA-like_sf	PANTHER:PTHR31867
PANTHER:PTHR31867:SF4	PFscan:PS50842	PRINTS:PR01225	SUPFAM:SSF50685	UniParc:UPI000253EF4E	UniProt:M4EAJ2
MapMan:35.1	:	:	:	:	:

Description

AT1G20190 (E=2e-030) ATEXPA11, EXP11, ATEXP11, ATHEXP ALPHA 1.14 | ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)

Coordinates

chrA06:-:8076675..8076946

Molecular Weight (calculated)

6297.3 Da

IEP (calculated)

4.061

GRAVY (calculated)

0.167

Length

63 amino acids

Sequence
(BLAST)

1: MAVDAFRPSG LTNGHATFYG WSDASGTMGG ACGYGDLYSA GYGIMTAALS TALFNNGASC GEC

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.