Factsheet for Bra019775.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98053	Canola	extracellular	100.0	100.0
CDY57071	Canola	extracellular	98.86	98.86
Bra016767.1-P	Field mustard	extracellular	95.06	95.06
Bra026965.1-P	Field mustard	extracellular	92.4	92.4
AT1G12560.1	Thale cress	extracellular	88.59	88.93
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	69.58	76.25
PGSC0003DMT400032527	Potato	extracellular	55.51	70.19
PGSC0003DMT400058522	Potato	plastid	63.88	68.57
KRH77459	Soybean	extracellular	67.3	68.08
KRH27987	Soybean	extracellular	67.3	68.08
VIT_02s0025g04700.t01	Wine grape	extracellular	65.02	64.77
GSMUA_Achr10P...	Banana	extracellular	63.88	64.62
KRH04002	Soybean	extracellular	65.02	64.53
GSMUA_Achr5P20270_001	Banana	extracellular	63.12	62.88
Solyc08g080060.2.1	Tomato	extracellular	63.88	62.45
Zm00001d047353_P001	Maize	extracellular	59.7	60.85
EER94586	Sorghum	extracellular	60.84	60.61
TraesCS1D01G203100.1	Wheat	extracellular	59.32	60.23
TraesCS1B01G214300.1	Wheat	extracellular	59.32	59.77
TraesCS1B01G214200.1	Wheat	extracellular	59.32	59.77
TraesCS1A01G199400.1	Wheat	extracellular	58.56	59.46
Os10t0535900-00	Rice	extracellular	59.7	59.02
KRH57276	Soybean	extracellular	49.05	56.33
Bra025800.1-P	Field mustard	cytosol, extracellular, plastid	13.31	55.56
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	58.94	55.16
Bra033068.1-P	Field mustard	cytosol	18.25	50.53
Bra023523.1-P	Field mustard	cytosol	44.49	50.0
Bra000142.1-P	Field mustard	extracellular	30.42	48.48
Solyc08g007780.2.1	Tomato	extracellular	23.19	48.03
Bra027249.1-P	Field mustard	cytosol, extracellular, plastid	40.68	46.52
Bra033099.1-P	Field mustard	extracellular	41.83	44.72
Bra016473.1-P	Field mustard	extracellular	28.9	44.71
Bra001593.1-P	Field mustard	extracellular	42.21	44.22
Bra025397.1-P	Field mustard	extracellular	41.83	44.18
Bra028232.1-P	Field mustard	extracellular	45.25	43.75
Bra030353.1-P	Field mustard	extracellular	41.06	42.35
HORVU1Hr1G051590.1	Barley	plastid	19.77	17.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EnsemblPlantsGene:Bra019775	EnsemblPlants:Bra019775.1	EnsemblPlants:Bra019775.1-P
InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	UniProt:M4DTD2	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF2	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	TMHMM:TMhelix	UniParc:UPI000253EC80

Description

AT1G12560 (E=1e-144) ATEXPA7, EXP7, ATEXP7, ATHEXP ALPHA 1.26, EXPA7 | ATEXPA7 (ARABIDOPSIS THALIANA EXPANSIN A7)

Coordinates

chrA06:-:4463935..4465106

Molecular Weight (calculated)

29236.6 Da

IEP (calculated)

9.468

GRAVY (calculated)

-0.178

Length

263 amino acids

Sequence
(BLAST)

001: MGPISSSWSF KKFLAIVFVV FAISGEFVAG YYRPSPWRYA HATFYGDETG SETMGGACGY GNLFNSGYGL NTAALSTTLF KDGYACGQCF QIMCVQSKHC
101: YYGNPSTVVT ATNLCPPNWY QDTNNGGWCN PPRTHFDMAK PAFMKLANWK AGIIPVSYRR VPCKRSGGMR FQFQGNAYWL LIFVMNVGGA GDIKSMAVKG
201: SRTNWISMSH NWGASYQAFS SLYGQSLSFR ITSYTTGETV YAWNVAPSNW NAGMTYKSYT NFR

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.