Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 6
- vacuole 4
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16014 | Canola | extracellular | 91.22 | 90.87 |
| Bra016767.1-P | Field mustard | extracellular | 90.84 | 90.49 |
| Bra026965.1-P | Field mustard | extracellular | 90.84 | 90.49 |
| CDY21056 | Canola | extracellular | 90.84 | 90.49 |
| CDY58613 | Canola | extracellular | 90.46 | 90.11 |
| CDY57071 | Canola | extracellular | 89.31 | 88.97 |
| Bra019775.1-P | Field mustard | extracellular | 88.93 | 88.59 |
| CDX98053 | Canola | extracellular | 88.93 | 88.59 |
| PGSC0003DMT400032527 | Potato | extracellular | 53.82 | 67.79 |
| AT1G62980.1 | Thale cress | extracellular | 66.03 | 67.32 |
| KRH77459 | Soybean | extracellular | 66.03 | 66.54 |
| KRH27987 | Soybean | extracellular | 66.03 | 66.54 |
| PGSC0003DMT400058522 | Potato | plastid | 62.21 | 66.53 |
| KRH04002 | Soybean | extracellular | 64.89 | 64.15 |
| GSMUA_Achr10P... | Banana | extracellular | 62.98 | 63.46 |
| VIT_02s0025g04700.t01 | Wine grape | extracellular | 63.36 | 62.88 |
| Zm00001d047353_P001 | Maize | extracellular | 61.83 | 62.79 |
| GSMUA_Achr5P20270_001 | Banana | extracellular | 62.98 | 62.5 |
| EER94586 | Sorghum | extracellular | 61.83 | 61.36 |
| TraesCS1D01G203100.1 | Wheat | extracellular | 60.31 | 61.0 |
| Solyc08g080060.2.1 | Tomato | extracellular | 62.6 | 60.97 |
| TraesCS1B01G214300.1 | Wheat | extracellular | 60.69 | 60.92 |
| TraesCS1B01G214200.1 | Wheat | extracellular | 60.31 | 60.54 |
| TraesCS1A01G199400.1 | Wheat | extracellular | 59.54 | 60.23 |
| Os10t0535900-00 | Rice | extracellular | 59.92 | 59.02 |
| TraesCS1A01G199300.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 59.54 | 55.52 |
| KRH57276 | Soybean | extracellular | 47.71 | 54.59 |
| Solyc08g007780.2.1 | Tomato | extracellular | 22.52 | 46.46 |
| AT5G39280.1 | Thale cress | extracellular | 46.56 | 44.36 |
| AT5G39300.1 | Thale cress | extracellular | 46.56 | 44.2 |
| AT5G39270.1 | Thale cress | extracellular | 46.95 | 44.09 |
| AT5G39290.1 | Thale cress | extracellular | 46.56 | 43.73 |
| AT5G39260.1 | Thale cress | extracellular | 42.37 | 42.37 |
| AT3G15370.2 | Thale cress | extracellular | 39.69 | 36.88 |
| AT5G39310.1 | Thale cress | extracellular | 40.84 | 34.29 |
| HORVU1Hr1G051590.1 | Barley | plastid | 19.85 | 17.33 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | EntrezGene:837813 | UniProt:A0A178W749 | ProteinID:AAF79645.1 |
| ProteinID:AAF88078.1 | ProteinID:AEE28897.1 | ArrayExpress:AT1G12560 | EnsemblPlantsGene:AT1G12560 | RefSeq:AT1G12560 | TAIR:AT1G12560 |
| RefSeq:AT1G12560-TAIR-G | EnsemblPlants:AT1G12560.1 | TAIR:AT1G12560.1 | Symbol:ATEXPA7 | Unigene:At.42070 | InterPro:Expan_Lol_pI |
| InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009664 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030154 |
| GO:GO:0030312 | GO:GO:0040007 | GO:GO:0048767 | GO:GO:0071555 | InterPro:IPR007112 | InterPro:IPR007117 |
| InterPro:IPR036749 | InterPro:IPR036908 | RefSeq:NP_172717.1 | ProteinID:OAP14299.1 | PFAM:PF01357 | PFAM:PF03330 |
| PO:PO:0000084 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0009005 | PRINTS:PR01225 | PRINTS:PR01226 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF2 | UniProt:Q9LN94 | InterPro:RlpA-like_DPBB |
| InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | TMHMM:TMhelix | UniParc:UPI000012A391 |
| SEG:seg | : | : | : | : | : |
Description
EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
Coordinates
chr1:+:4276505..4277969
Molecular Weight (calculated)
28792.9 Da
IEP (calculated)
9.383
GRAVY (calculated)
-0.171
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.