Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019775.1-P | Field mustard | extracellular | 100.0 | 100.0 |
| CDY57071 | Canola | extracellular | 98.86 | 98.86 |
| CDY21056 | Canola | extracellular | 95.06 | 95.06 |
| CDY58613 | Canola | extracellular | 94.68 | 94.68 |
| CDY16014 | Canola | extracellular | 92.78 | 92.78 |
| AT1G12560.1 | Thale cress | extracellular | 88.59 | 88.93 |
| CDY64890 | Canola | extracellular | 71.1 | 72.76 |
| PGSC0003DMT400032527 | Potato | extracellular | 55.51 | 70.19 |
| CDY69805 | Canola | extracellular | 40.68 | 69.48 |
| PGSC0003DMT400058522 | Potato | plastid | 63.88 | 68.57 |
| KRH77459 | Soybean | extracellular | 67.3 | 68.08 |
| KRH27987 | Soybean | extracellular | 67.3 | 68.08 |
| VIT_02s0025g04700.t01 | Wine grape | extracellular | 65.02 | 64.77 |
| GSMUA_Achr10P... | Banana | extracellular | 63.88 | 64.62 |
| KRH04002 | Soybean | extracellular | 65.02 | 64.53 |
| GSMUA_Achr5P20270_001 | Banana | extracellular | 63.12 | 62.88 |
| Solyc08g080060.2.1 | Tomato | extracellular | 63.88 | 62.45 |
| Zm00001d047353_P001 | Maize | extracellular | 59.7 | 60.85 |
| EER94586 | Sorghum | extracellular | 60.84 | 60.61 |
| TraesCS1D01G203100.1 | Wheat | extracellular | 59.32 | 60.23 |
| TraesCS1B01G214200.1 | Wheat | extracellular | 59.32 | 59.77 |
| TraesCS1B01G214300.1 | Wheat | extracellular | 59.32 | 59.77 |
| TraesCS1A01G199400.1 | Wheat | extracellular | 58.56 | 59.46 |
| Os10t0535900-00 | Rice | extracellular | 59.7 | 59.02 |
| KRH57276 | Soybean | extracellular | 49.05 | 56.33 |
| TraesCS1A01G199300.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 58.94 | 55.16 |
| CDY71742 | Canola | extracellular | 41.06 | 53.73 |
| CDY71009 | Canola | extracellular | 41.06 | 53.73 |
| CDY44069 | Canola | extracellular | 30.8 | 51.92 |
| CDY66063 | Canola | cytosol, extracellular, plastid | 31.56 | 50.3 |
| Solyc08g007780.2.1 | Tomato | extracellular | 23.19 | 48.03 |
| CDX85546 | Canola | extracellular | 44.49 | 46.25 |
| CDX75827 | Canola | extracellular | 38.78 | 45.95 |
| CDX90986 | Canola | extracellular | 43.35 | 45.06 |
| CDY44393 | Canola | extracellular | 41.83 | 44.72 |
| CDY04077 | Canola | extracellular | 41.83 | 44.72 |
| CDX82436 | Canola | extracellular | 42.21 | 44.22 |
| CDX86367 | Canola | extracellular | 41.83 | 44.18 |
| CDX85270 | Canola | extracellular | 41.83 | 44.18 |
| CDX74479 | Canola | extracellular | 45.63 | 44.12 |
| CDY37873 | Canola | extracellular | 45.63 | 44.12 |
| CDX97663 | Canola | extracellular | 41.44 | 43.43 |
| CDX98555 | Canola | extracellular | 41.44 | 43.43 |
| CDY15952 | Canola | extracellular | 41.06 | 42.35 |
| CDX99666 | Canola | extracellular | 41.83 | 40.89 |
| CDY44426 | Canola | extracellular | 17.49 | 38.02 |
| HORVU1Hr1G051590.1 | Barley | plastid | 19.77 | 17.33 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | GO:A0A078EFE3 | EnsemblPlants:CDX98053 | ProteinID:CDX98053 |
| ProteinID:CDX98053.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009664 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0030312 | EnsemblPlantsGene:GSBRNA2T00105427001 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF2 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | TMHMM:TMhelix |
| UniParc:UPI000253EC80 | : | : | : | : | : |
Description
BnaA06g08040D
Coordinates
chrLK031902:-:745557..746728
Molecular Weight (calculated)
29236.6 Da
IEP (calculated)
9.468
GRAVY (calculated)
-0.178
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPISSSWSF KKFLAIVFVV FAISGEFVAG YYRPSPWRYA HATFYGDETG SETMGGACGY GNLFNSGYGL NTAALSTTLF KDGYACGQCF QIMCVQSKHC
101: YYGNPSTVVT ATNLCPPNWY QDTNNGGWCN PPRTHFDMAK PAFMKLANWK AGIIPVSYRR VPCKRSGGMR FQFQGNAYWL LIFVMNVGGA GDIKSMAVKG
201: SRTNWISMSH NWGASYQAFS SLYGQSLSFR ITSYTTGETV YAWNVAPSNW NAGMTYKSYT NFR
101: YYGNPSTVVT ATNLCPPNWY QDTNNGGWCN PPRTHFDMAK PAFMKLANWK AGIIPVSYRR VPCKRSGGMR FQFQGNAYWL LIFVMNVGGA GDIKSMAVKG
201: SRTNWISMSH NWGASYQAFS SLYGQSLSFR ITSYTTGETV YAWNVAPSNW NAGMTYKSYT NFR
001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
Arabidopsis Description
EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.