Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033099.1-P | Field mustard | extracellular | 99.19 | 99.19 |
| CDY04077 | Canola | extracellular | 98.37 | 98.37 |
| CDX86367 | Canola | extracellular | 81.71 | 80.72 |
| CDX85270 | Canola | extracellular | 80.49 | 79.52 |
| KRH01265 | Soybean | extracellular | 57.72 | 62.28 |
| VIT_07s0005g04850.t01 | Wine grape | extracellular | 59.76 | 61.25 |
| KRH44992 | Soybean | extracellular | 63.41 | 60.23 |
| Solyc03g115310.1.1 | Tomato | extracellular | 60.98 | 57.92 |
| Solyc03g115270.1.1 | Tomato | extracellular | 59.76 | 56.76 |
| Solyc03g115350.1.1 | Tomato | extracellular | 59.35 | 56.59 |
| CDX85546 | Canola | extracellular | 58.13 | 56.52 |
| CDY15952 | Canola | extracellular | 58.54 | 56.47 |
| CDX90986 | Canola | extracellular | 57.32 | 55.73 |
| CDX99666 | Canola | extracellular | 59.76 | 54.65 |
| Solyc03g115320.1.1 | Tomato | extracellular | 57.72 | 54.62 |
| Solyc03g115300.1.1 | Tomato | extracellular | 56.5 | 53.67 |
| Solyc03g115340.1.1 | Tomato | mitochondrion | 37.4 | 51.98 |
| CDX74479 | Canola | extracellular | 56.5 | 51.1 |
| CDY37873 | Canola | extracellular | 56.5 | 51.1 |
| CDY66063 | Canola | cytosol, extracellular, plastid | 34.15 | 50.91 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 50.41 | 50.0 |
| HORVU7Hr1G075680.1 | Barley | extracellular | 51.63 | 49.22 |
| TraesCS7D01G314100.1 | Wheat | extracellular | 51.22 | 48.84 |
| CDY44069 | Canola | extracellular | 30.49 | 48.08 |
| GSMUA_Achr4P27950_001 | Banana | extracellular | 47.56 | 47.56 |
| GSMUA_Achr4P28010_001 | Banana | extracellular | 47.15 | 47.15 |
| GSMUA_Achr4P27910_001 | Banana | extracellular | 47.15 | 47.15 |
| EES14420 | Sorghum | extracellular | 50.41 | 46.62 |
| Zm00001d035083_P001 | Maize | extracellular | 51.63 | 45.85 |
| CDX75827 | Canola | extracellular | 41.06 | 45.5 |
| CDY71009 | Canola | extracellular | 35.77 | 43.78 |
| CDY71742 | Canola | extracellular | 35.77 | 43.78 |
| CDX97663 | Canola | extracellular | 44.31 | 43.43 |
| CDX98555 | Canola | extracellular | 43.9 | 43.03 |
| CDX82436 | Canola | extracellular | 43.9 | 43.03 |
| CDY16014 | Canola | extracellular | 45.53 | 42.59 |
| CDY69805 | Canola | extracellular | 26.42 | 42.21 |
| CDY58613 | Canola | extracellular | 45.12 | 42.21 |
| CDY21056 | Canola | extracellular | 45.12 | 42.21 |
| CDX98053 | Canola | extracellular | 44.72 | 41.83 |
| CDY57071 | Canola | extracellular | 44.31 | 41.44 |
| CDY64890 | Canola | extracellular | 42.68 | 40.86 |
| CDY44426 | Canola | extracellular | 18.7 | 38.02 |
| Os12t0546800-01 | Rice | plasma membrane | 42.68 | 36.21 |
| PGSC0003DMT400063359 | Potato | cytosol, plastid, vacuole | 54.06 | 32.44 |
| PGSC0003DMT400063363 | Potato | extracellular | 59.35 | 29.92 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | GO:A0A078I5G5 | UniProt:A0A078I5G5 | EnsemblPlants:CDY44393 |
| ProteinID:CDY44393 | ProteinID:CDY44393.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 | EnsemblPlantsGene:GSBRNA2T00080066001 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF33 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| UniParc:UPI0004EE56F8 | : | : | : | : | : |
Description
BnaA02g29840DBnaA02g29840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5G5]
Coordinates
chrLK032588:-:79319..80221
Molecular Weight (calculated)
27145.3 Da
IEP (calculated)
8.385
GRAVY (calculated)
-0.174
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRSMSLVML LAILVSVADA AWEDAHATFY GDISGKETMQ GACGYGDLFQ EGYGLETAAL STALFNNGQT CGACFELTCV NSQWCKQNAG TIRITATNFC
101: PPNYTPPVDI HWCNPPNKHF DLSMKMFTSI AEYKSGIVPV KFRRVKCQKR GGVRFEVKGN PNFIMVLVYN VGGAGDVNSL AIKGHKSNWI SMQRNWGQNW
201: NTGVGLVGQR LSFTVKTSDG RSLTFYDVAS ESWGFGQTFE AKSNFY
101: PPNYTPPVDI HWCNPPNKHF DLSMKMFTSI AEYKSGIVPV KFRRVKCQKR GGVRFEVKGN PNFIMVLVYN VGGAGDVNSL AIKGHKSNWI SMQRNWGQNW
201: NTGVGLVGQR LSFTVKTSDG RSLTFYDVAS ESWGFGQTFE AKSNFY
001: MNLLGKMIYV EGFMMIMATL LVSMSYGHRA MINDVAEAPV FDDVVSPNGL DSSWYDARAT FYGDIHGGET QQGACGYGDL FKQGYGLETA ALSTALFNEG
101: YTCGACYQIM CVNDPQWCLP GSVKITATNF CPPDYSKTEG VWCNPPQKHF DLSLPMFLKI AQYKAGVVPV KYRRISCART GGVKFETKGN PYFLMILPYN
201: VGGAGDIKLM QVKGDKTGWI TMQKNWGQNW TTGVNLTGQG ISFRVTTSDG VTKDFNNVMP NNWGFGQTFD GKINF
101: YTCGACYQIM CVNDPQWCLP GSVKITATNF CPPDYSKTEG VWCNPPQKHF DLSLPMFLKI AQYKAGVVPV KYRRISCART GGVKFETKGN PYFLMILPYN
201: VGGAGDIKLM QVKGDKTGWI TMQKNWGQNW TTGVNLTGQG ISFRVTTSDG VTKDFNNVMP NNWGFGQTFD GKINF
Arabidopsis Description
EXPA23Expansin-A23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL79]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.