CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44992	Soybean	extracellular	94.3	83.01
VIT_14s0068g00600.t01	Wine grape	extracellular	66.67	60.56
CDY44393	Canola	extracellular	62.28	57.72
CDY04077	Canola	extracellular	61.84	57.32
Bra033099.1-P	Field mustard	extracellular	61.4	56.91
CDX86367	Canola	extracellular	59.65	54.62
Bra025397.1-P	Field mustard	extracellular	59.65	54.62
CDX85270	Canola	extracellular	59.21	54.22
Solyc03g115310.1.1	Tomato	extracellular	60.96	53.67
Solyc03g115270.1.1	Tomato	extracellular	60.09	52.9
Solyc03g115340.1.1	Tomato	mitochondrion	40.79	52.54
Solyc03g115300.1.1	Tomato	extracellular	59.65	52.51
Solyc03g115350.1.1	Tomato	extracellular	59.21	52.33
Solyc03g115320.1.1	Tomato	extracellular	59.21	51.92
KRH67777	Soybean	cytosol	35.09	50.31
Bra030353.1-P	Field mustard	extracellular	55.7	49.8
CDY15952	Canola	extracellular	55.7	49.8
CDX99666	Canola	extracellular	56.58	47.96
CDX74479	Canola	extracellular	56.58	47.43
CDY37873	Canola	extracellular	56.58	47.43
Bra028232.1-P	Field mustard	extracellular	56.14	47.06
AT5G39270.1	Thale cress	extracellular	57.46	46.95
AT5G39280.1	Thale cress	extracellular	56.14	46.55
AT5G39300.1	Thale cress	extracellular	56.14	46.38
AT5G39290.1	Thale cress	extracellular	56.58	46.24
AT5G39260.1	Thale cress	extracellular	53.07	46.18
GSMUA_Achr4P27950_001	Banana	extracellular	49.12	45.53
KRH56899	Soybean	extracellular, mitochondrion, nucleus, plastid	18.86	44.79
EES14420	Sorghum	extracellular	52.19	44.74
GSMUA_Achr4P28010_001	Banana	extracellular	48.25	44.72
GSMUA_Achr4P27910_001	Banana	extracellular	48.25	44.72
KRH77459	Soybean	extracellular	50.0	43.85
KRH51669	Soybean	extracellular	47.81	43.25
KRH27987	Soybean	extracellular	49.12	43.08
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	46.49	42.74
AT5G39310.1	Thale cress	extracellular	57.46	41.99
HORVU7Hr1G075680.1	Barley	extracellular	47.37	41.86
TraesCS7D01G314100.1	Wheat	extracellular	46.93	41.47
KRH04002	Soybean	extracellular	47.37	40.75
KRH57276	Soybean	extracellular	40.79	40.61
Zm00001d035083_P001	Maize	extracellular	49.12	40.43
KRH26080	Soybean	extracellular	42.98	38.28
KRH55327	Soybean	extracellular	42.98	38.13
PGSC0003DMT400063359	Potato	cytosol, plastid, vacuole	52.19	29.02
PGSC0003DMT400063363	Potato	extracellular	59.21	27.66

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EMBL:ACUP02011509	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_18G265400	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
UniProt:K7MUX6	EnsemblPlants:KRH01265	ProteinID:KRH01265	ProteinID:KRH01265.1	PFAM:PF01357	PFAM:PF03330
PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF33
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00029642BF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:55017312..55018922

Molecular Weight (calculated)

25255.4 Da

IEP (calculated)

8.466

GRAVY (calculated)

-0.067

Length

228 amino acids

Sequence
(BLAST)

001: MARSHCLFPL AFLMVLFVPA LAHGRRRGWH LAHATFYGDM QGGDTMQGAC GYGDLYQQGY GLETTALSTA LFNNGQTCGA CFEIMCVNSQ WCIPNAGPIK
101: HFDLSMKMFT KIAIYKAGII PVMYRRVPCN KSGGVKFEMK GNPYWLLVLL YNVGNAGDVT QVSIKGSSNT GWQSMSRVWG QNWVTGSNLV GQALSFQVTT
201: SDGKMLEFDN VAPSNWQFGQ SYETYQNF

Best Arabidopsis Sequence Match ( AT5G39270.1 )
(BLAST)

001: MKLLEKMIYV EFLMIIMVIW VVPMSYGHGA MIGNAVEAPD VAEAPGINDP SKALDTNWYD ARATFYGDIH GGDTQQGACG YGNLFRQGYG LATAALSTAL
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKGNK TGWITMKKNW GQNWTTITVL TGQGLSFRVT TSDGITKDFW NVMPKNWGFG QTFDGRINF

Arabidopsis Description

EXPA22Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.