CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01265	Soybean	extracellular	83.01	94.3
VIT_14s0068g00600.t01	Wine grape	extracellular	64.48	66.53
CDY44393	Canola	extracellular	60.23	63.41
CDY04077	Canola	extracellular	59.85	63.01
Bra033099.1-P	Field mustard	extracellular	59.46	62.6
KRH56899	Soybean	extracellular, mitochondrion, nucleus, plastid	23.17	62.5
Bra025397.1-P	Field mustard	extracellular	59.85	62.25
CDX86367	Canola	extracellular	59.85	62.25
CDX85270	Canola	extracellular	59.07	61.45
Solyc03g115310.1.1	Tomato	extracellular	59.07	59.07
Solyc03g115270.1.1	Tomato	extracellular	58.69	58.69
Solyc03g115300.1.1	Tomato	extracellular	58.3	58.3
Solyc03g115350.1.1	Tomato	extracellular	57.14	57.36
Solyc03g115320.1.1	Tomato	extracellular	56.76	56.54
Bra030353.1-P	Field mustard	extracellular	54.83	55.69
CDY15952	Canola	extracellular	54.83	55.69
Solyc03g115340.1.1	Tomato	mitochondrion	36.68	53.67
CDX99666	Canola	extracellular	55.6	53.53
CDY37873	Canola	extracellular	55.6	52.94
CDX74479	Canola	extracellular	55.6	52.94
KRH67777	Soybean	cytosol	32.43	52.83
AT5G39270.1	Thale cress	extracellular	56.76	52.69
Bra028232.1-P	Field mustard	extracellular	55.21	52.57
AT5G39280.1	Thale cress	extracellular	55.6	52.36
AT5G39300.1	Thale cress	extracellular	55.6	52.17
AT5G39290.1	Thale cress	extracellular	55.98	51.97
GSMUA_Achr4P27950_001	Banana	extracellular	49.03	51.63
GSMUA_Achr4P28010_001	Banana	extracellular	48.26	50.81
GSMUA_Achr4P27910_001	Banana	extracellular	48.26	50.81
EES14420	Sorghum	extracellular	52.12	50.75
KRH51669	Soybean	extracellular	49.03	50.4
AT5G39260.1	Thale cress	extracellular	50.19	49.62
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	47.1	49.19
TraesCS7D01G314100.1	Wheat	extracellular	48.26	48.45
HORVU7Hr1G075680.1	Barley	extracellular	47.88	48.06
AT5G39310.1	Thale cress	extracellular	57.53	47.76
KRH77459	Soybean	extracellular	47.88	47.69
KRH27987	Soybean	extracellular	47.88	47.69
Zm00001d035083_P001	Maize	extracellular	49.42	46.21
KRH04002	Soybean	extracellular	46.72	45.66
KRH26080	Soybean	extracellular	43.24	43.75
KRH55327	Soybean	extracellular	43.24	43.58
KRH57276	Soybean	extracellular	37.45	42.36
PGSC0003DMT400063359	Potato	cytosol, plastid, vacuole	52.51	33.17
PGSC0003DMT400063363	Potato	extracellular	57.53	30.53

Protein Annotations

EntrezGene:100789595	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A0R0IRT2	EMBL:ACUP02004977
InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_08G243200
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	EnsemblPlants:KRH44992	ProteinID:KRH44992	ProteinID:KRH44992.1	PFAM:PF01357
PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867
PANTHER:PTHR31867:SF33	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00023CAE80	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:20834633..20836265

Molecular Weight (calculated)

28773.4 Da

IEP (calculated)

7.948

GRAVY (calculated)

-0.149

Length

259 amino acids

Sequence
(BLAST)

001: MVMGRSHCLV SLAFLMVLFV PALSHGSRHR RSGWHLAHAT FYGDMQGGDT MQGACGYGDL YQQGYGLETT ALSTALFNNG LTCGACFEIM CVNEPQWCIP
101: NAGSIKVTAT NFCPPNYNPP NFDHWCNPPQ EHFDLSMKMF TKIAIYRAGI IPVMYRRVPC NKSGGVKFEM KGNPYWLLVL LYNVASAGDV TQVSIKGSSN
201: TGWKSMSRVW GQNWVTGSNL VGQALSFQVT TSDGKMMEFD NVAPSNWQFG QSYETYQNF

Best Arabidopsis Sequence Match ( AT5G39270.1 )
(BLAST)

001: MKLLEKMIYV EFLMIIMVIW VVPMSYGHGA MIGNAVEAPD VAEAPGINDP SKALDTNWYD ARATFYGDIH GGDTQQGACG YGNLFRQGYG LATAALSTAL
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKGNK TGWITMKKNW GQNWTTITVL TGQGLSFRVT TSDGITKDFW NVMPKNWGFG QTFDGRINF

Arabidopsis Description

EXPA22Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.