Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g115310.1.1 | Tomato | extracellular | 82.95 | 82.63 |
| Solyc03g115270.1.1 | Tomato | extracellular | 82.17 | 81.85 |
| Solyc03g115320.1.1 | Tomato | extracellular | 78.68 | 78.08 |
| Solyc03g115300.1.1 | Tomato | extracellular | 75.19 | 74.9 |
| Solyc03g115340.1.1 | Tomato | mitochondrion | 50.39 | 73.45 |
| VIT_14s0068g00600.t01 | Wine grape | extracellular | 63.95 | 65.74 |
| VIT_07s0005g04850.t01 | Wine grape | extracellular | 58.53 | 62.92 |
| Bra023523.1-P | Field mustard | cytosol | 56.2 | 61.97 |
| CDY04077 | Canola | extracellular | 57.36 | 60.16 |
| CDY44393 | Canola | extracellular | 56.59 | 59.35 |
| Bra033099.1-P | Field mustard | extracellular | 56.59 | 59.35 |
| KRH01265 | Soybean | extracellular | 52.33 | 59.21 |
| CDX85546 | Canola | extracellular | 57.36 | 58.5 |
| CDX86367 | Canola | extracellular | 56.2 | 58.23 |
| Bra025397.1-P | Field mustard | extracellular | 56.2 | 58.23 |
| CDX90986 | Canola | extracellular | 56.59 | 57.71 |
| CDX85270 | Canola | extracellular | 55.43 | 57.43 |
| KRH44992 | Soybean | extracellular | 57.36 | 57.14 |
| CDY15952 | Canola | extracellular | 54.26 | 54.9 |
| Bra030353.1-P | Field mustard | extracellular | 54.26 | 54.9 |
| AT5G39280.1 | Thale cress | extracellular | 57.36 | 53.82 |
| CDX74479 | Canola | extracellular | 56.59 | 53.68 |
| CDY37873 | Canola | extracellular | 56.59 | 53.68 |
| AT5G39300.1 | Thale cress | extracellular | 57.36 | 53.62 |
| CDX99666 | Canola | extracellular | 55.81 | 53.53 |
| Bra028232.1-P | Field mustard | extracellular | 56.2 | 53.31 |
| AT5G39270.1 | Thale cress | extracellular | 55.81 | 51.61 |
| AT5G39290.1 | Thale cress | extracellular | 55.43 | 51.25 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 48.45 | 50.4 |
| GSMUA_Achr4P27950_001 | Banana | extracellular | 47.29 | 49.59 |
| GSMUA_Achr4P27910_001 | Banana | extracellular | 47.29 | 49.59 |
| TraesCS7D01G314100.1 | Wheat | extracellular | 49.22 | 49.22 |
| AT5G39260.1 | Thale cress | extracellular | 49.61 | 48.85 |
| GSMUA_Achr4P28010_001 | Banana | extracellular | 46.51 | 48.78 |
| HORVU7Hr1G075680.1 | Barley | extracellular | 48.06 | 48.06 |
| Solyc08g080060.2.1 | Tomato | extracellular | 50.0 | 47.96 |
| AT5G39310.1 | Thale cress | extracellular | 56.98 | 47.12 |
| EES14420 | Sorghum | extracellular | 48.45 | 46.99 |
| Zm00001d035083_P001 | Maize | extracellular | 47.67 | 44.4 |
| PGSC0003DMT400063363 | Potato | extracellular | 83.72 | 44.26 |
| Solyc07g063210.2.1 | Tomato | extracellular | 43.02 | 43.36 |
| Solyc08g007780.2.1 | Tomato | extracellular | 20.93 | 42.52 |
| Os12t0546800-01 | Rice | plasma membrane | 41.47 | 36.9 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | UniProt:K4BL37 | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 |
| PANTHER:PTHR31867:SF33 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc03g115350.1 | EnsemblPlants:Solyc03g115350.1.1 | TMHMM:TMhelix | UniParc:UPI000276879F | SEG:seg |
Description
No Description!
Coordinates
chr3:-:65085317..65086652
Molecular Weight (calculated)
28947.7 Da
IEP (calculated)
8.391
GRAVY (calculated)
-0.161
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKHQSFFIL FITFYIILLV EAYESNEGSL QAHGWKHARA TFYGDMSGGE TMQGACGYGD LFKQGYGLET AALSTALFNN GATCGACFQI MCVNDRKACH
101: PGRIITITAT NFCPPNYTKT QDIWCNPPQH HFDLSLPLFL QIAEYKAGVV PVVYRRVSCQ KKGGLKFEIK GNPNWIIVLV FNVGGVGDVV NVKIKGSKTG
201: WVPMRRNWGQ RWDVSEPLLG QSLSFQVQTS DGKWVQSDNV APRDWQFGQM FEANHNFW
101: PGRIITITAT NFCPPNYTKT QDIWCNPPQH HFDLSLPLFL QIAEYKAGVV PVVYRRVSCQ KKGGLKFEIK GNPNWIIVLV FNVGGVGDVV NVKIKGSKTG
201: WVPMRRNWGQ RWDVSEPLLG QSLSFQVQTS DGKWVQSDNV APRDWQFGQM FEANHNFW
001: MNLLGKMIYV EGFMMIMATL LVSMSYGHRA MINDVAEAPV FDDVVSPNGL DSSWYDARAT FYGDIHGGET QQGACGYGDL FKQGYGLETA ALSTALFNEG
101: YTCGACYQIM CVNDPQWCLP GSVKITATNF CPPDYSKTEG VWCNPPQKHF DLSLPMFLKI AQYKAGVVPV KYRRISCART GGVKFETKGN PYFLMILPYN
201: VGGAGDIKLM QVKGDKTGWI TMQKNWGQNW TTGVNLTGQG ISFRVTTSDG VTKDFNNVMP NNWGFGQTFD GKINF
101: YTCGACYQIM CVNDPQWCLP GSVKITATNF CPPDYSKTEG VWCNPPQKHF DLSLPMFLKI AQYKAGVVPV KYRRISCART GGVKFETKGN PYFLMILPYN
201: VGGAGDIKLM QVKGDKTGWI TMQKNWGQNW TTGVNLTGQG ISFRVTTSDG VTKDFNNVMP NNWGFGQTFD GKINF
Arabidopsis Description
EXPA23Expansin-A23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL79]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.