Factsheet for TraesCS7D01G314100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	92.64	96.37
HORVU7Hr1G075680.1	Barley	extracellular	91.86	91.86
EES14420	Sorghum	extracellular	67.05	65.04
Zm00001d035083_P001	Maize	extracellular	66.28	61.73
VIT_14s0068g00600.t01	Wine grape	extracellular	55.04	56.57
Bra023523.1-P	Field mustard	cytosol	47.67	52.56
VIT_07s0005g04850.t01	Wine grape	extracellular	48.45	52.08
CDY04077	Canola	extracellular	49.22	51.63
Bra033099.1-P	Field mustard	extracellular	48.84	51.22
CDY44393	Canola	extracellular	48.84	51.22
Bra025397.1-P	Field mustard	extracellular	48.45	50.2
CDX86367	Canola	extracellular	48.45	50.2
CDX85270	Canola	extracellular	48.06	49.8
Solyc03g115310.1.1	Tomato	extracellular	49.61	49.42
Solyc03g115270.1.1	Tomato	extracellular	49.61	49.42
Solyc03g115320.1.1	Tomato	extracellular	49.61	49.23
Solyc03g115350.1.1	Tomato	extracellular	49.22	49.22
CDX85546	Canola	extracellular	48.06	49.01
CDX90986	Canola	extracellular	48.06	49.01
KRH44992	Soybean	extracellular	48.45	48.26
Solyc03g115300.1.1	Tomato	extracellular	48.06	47.88
KRH01265	Soybean	extracellular	41.47	46.93
AT5G39270.1	Thale cress	extracellular	50.39	46.59
GSMUA_Achr4P27950_001	Banana	extracellular	44.19	46.34
Solyc03g115340.1.1	Tomato	mitochondrion	31.78	46.33
AT5G39290.1	Thale cress	extracellular	50.0	46.24
GSMUA_Achr4P28010_001	Banana	extracellular	43.8	45.94
GSMUA_Achr4P27910_001	Banana	extracellular	43.8	45.94
CDY15952	Canola	extracellular	45.35	45.88
Bra030353.1-P	Field mustard	extracellular	45.35	45.88
AT5G39300.1	Thale cress	extracellular	48.45	45.29
CDY37873	Canola	extracellular	47.67	45.22
CDX74479	Canola	extracellular	47.67	45.22
TraesCS1D01G203100.1	Wheat	extracellular	45.35	45.17
AT5G39280.1	Thale cress	extracellular	48.06	45.09
TraesCS3D01G313100.1	Wheat	extracellular	43.41	44.98
Bra028232.1-P	Field mustard	extracellular	47.29	44.85
TraesCS3D01G175800.1	Wheat	extracellular	43.41	44.62
TraesCS4D01G271800.1	Wheat	extracellular	42.64	44.18
TraesCS3D01G313400.1	Wheat	extracellular	42.64	44.18
CDX99666	Canola	extracellular	45.74	43.87
TraesCS3D01G313300.1	Wheat	extracellular	41.47	43.85
TraesCS3D01G313200.1	Wheat	extracellular	41.86	43.37
TraesCS5D01G527700.1	Wheat	extracellular	42.64	43.14
TraesCS3D01G176000.1	Wheat	extracellular	42.64	43.14
TraesCS4D01G271700.1	Wheat	extracellular	42.25	43.08
TraesCS4D01G271900.1	Wheat	extracellular	42.25	43.08
TraesCS5D01G535500.1	Wheat	extracellular	42.25	42.75
TraesCS5D01G527800.1	Wheat	extracellular	42.25	42.58
TraesCS4D01G270500.1	Wheat	extracellular	41.86	42.52
AT5G39260.1	Thale cress	extracellular	42.64	41.98
AT5G39310.1	Thale cress	extracellular	47.29	39.1
TraesCS7D01G019600.1	Wheat	plastid	37.6	37.02
TraesCS3D01G030100.1	Wheat	extracellular	27.13	34.15
Os12t0546800-01	Rice	plasma membrane	36.43	32.41
PGSC0003DMT400063359	Potato	cytosol, plastid, vacuole	43.8	27.56
PGSC0003DMT400063363	Potato	extracellular	49.22	26.02

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF33	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G314100	EnsemblPlants:TraesCS7D01G314100.1	SEG:seg

Description

No Description!

Coordinates

chr7D:+:399426744..399427618

Molecular Weight (calculated)

27775.2 Da

IEP (calculated)

7.734

GRAVY (calculated)

-0.035

Length

258 amino acids

Sequence
(BLAST)

001: METRRPAVSA VSVGAVVLIL VWSPAAAVAS GGWMDAHATF YGDETGAETM QGACGYGNLF EQGYGLDTTA LSVALFSDGW SCGGCYEIQC HGDPHCKPGG
101: AQVTVTATNL CPANYSKPYE NWCNPPLKHF DLSKPMFLRL VTDFHVGIIP VQYRRVPCAK KGGIRIEMTG NQYWVGVLVF NVAGPGEVKV LAVKGAKDGQ
201: WRNMKRNWGQ IWDGHVQNLV GQGLSFRVVA SDGRSVVLDG VVPASWTIGQ SFEGKGQF

Best Arabidopsis Sequence Match ( AT5G02260.1 )
(BLAST)

001: MAAKVITFMA VMVVTAFTAN AKIPGVYTGG PWINAHATFY GEADASGTMG GACGYGNLYS QGYGVNTAAL STALFNNGLS CGSCFELKCI NDPGWCLPGN
101: PSILITATNF CPPNFNQASD NGGWCNPPRE HFDLAMPMFL SIAKYKAGIV PVSYRRIPCR KKGGIRFTIN GFKYFNLVLV TNVAGAGDVI KVSVKGSNTQ
201: WLDLSRNWGQ NWQSNALLVG QSLSFRVKTS DGRSSTSNNI APSNWQFGQT YSGKNFRV

Arabidopsis Description

EXPA9EXPA9 [Source:UniProtKB/TrEMBL;Acc:A0A178UHJ8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.