Factsheet for TraesCS7D01G019600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G470100.1	Wheat	extracellular	93.51	88.45
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	86.26	67.87
EER89054	Sorghum	extracellular	64.12	60.87
Os06t0108600-00	Rice	extracellular	62.21	60.82
Zm00001d045571_P001	Maize	extracellular	62.98	60.66
TraesCS1D01G203100.1	Wheat	extracellular	49.62	50.19
GSMUA_Achr1P15400_001	Banana	extracellular	46.95	46.95
TraesCS3D01G175800.1	Wheat	extracellular	39.69	41.43
TraesCS3D01G313100.1	Wheat	extracellular	39.31	41.37
TraesCS5D01G527700.1	Wheat	extracellular	39.69	40.78
TraesCS4D01G271900.1	Wheat	extracellular	39.31	40.71
TraesCS3D01G313300.1	Wheat	extracellular	37.79	40.57
TraesCS3D01G313200.1	Wheat	extracellular	38.55	40.56
TraesCS3D01G313400.1	Wheat	extracellular	38.55	40.56
TraesCS4D01G270500.1	Wheat	extracellular	39.31	40.55
TraesCS5D01G527800.1	Wheat	extracellular	39.31	40.23
TraesCS4D01G271800.1	Wheat	extracellular	38.17	40.16
TraesCS4D01G271700.1	Wheat	extracellular	38.17	39.53
TraesCS5D01G535500.1	Wheat	extracellular	38.17	39.22
TraesCS7D01G314100.1	Wheat	extracellular	37.02	37.6
TraesCS3D01G176000.1	Wheat	extracellular	35.5	36.47
TraesCS3D01G030100.1	Wheat	extracellular	25.95	33.17

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF25	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	EnsemblPlantsGene:TraesCS7D01G019600	EnsemblPlants:TraesCS7D01G019600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:-:8462330..8463358

Molecular Weight (calculated)

28296.3 Da

IEP (calculated)

7.617

GRAVY (calculated)

-0.153

Length

262 amino acids

Sequence
(BLAST)

001: MAAAAAQLAN AGFPNQYWPA PSTPSTGFPT YGWENAHATF YGSDSGLGHD FGGACGYSGS DIASLYSTRT AALSTPLFAK GDGCGRCYEI RCVQSKWCVP
101: GSPSVVITGT NLCPPNWYQD SNDGGWCNPP RRHFDMAPPS FYKLAARVAG IVPVQFRRVP CERSGGVQFC LMGNPYWLLV HVNNVGGGGD IGQIAVRETG
201: GVWIQMTQNW GITFQAFFEL DRSKGLQFMI TGGTDRKTIV VGDAVPAWWS TGLCYQGSNN FW

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.