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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G528500.1 Wheat extracellular 98.43 98.82
TraesCS1A01G406900.1 Wheat extracellular 97.65 98.03
TraesCS4A01G345000.1 Wheat extracellular 97.65 98.03
HORVU5Hr1G119860.2 Barley extracellular 94.9 95.28
TraesCS5D01G527800.1 Wheat extracellular 93.73 93.36
TraesCS4D01G270500.1 Wheat extracellular 90.98 91.34
HORVU5Hr1G119670.1 Barley extracellular 96.08 87.19
HORVU5Hr1G119680.4 Barley extracellular 94.9 85.51
TraesCS4D01G271700.1 Wheat extracellular 84.31 84.98
TraesCS4D01G271900.1 Wheat extracellular 83.92 84.58
TraesCS4D01G271800.1 Wheat extracellular 82.35 84.34
Os03t0155900-01 Rice extracellular 70.59 72.29
Os03t0156000-00 Rice extracellular 70.59 72.29
Zm00001d035101_P001 Maize extracellular 59.22 71.23
Os03t0156300-00 Rice extracellular 66.67 70.83
Zm00001d035104_P001 Maize cytosol, extracellular, plastid 58.82 70.75
Zm00001d035111_P001 Maize extracellular 70.2 70.47
Zm00001d035108_P001 Maize extracellular 69.8 70.08
Zm00001d035102_P001 Maize extracellular 69.8 70.08
Zm00001d035109_P001 Maize extracellular 69.02 69.29
Zm00001d035100_P001 Maize extracellular 69.41 69.14
EES13271 Sorghum extracellular 69.41 68.34
Zm00001d035112_P001 Maize extracellular 54.51 68.14
EES13270 Sorghum extracellular 68.63 67.31
EES14433 Sorghum plastid 69.41 63.67
TraesCS3D01G313100.1 Wheat extracellular 61.18 62.65
TraesCS3D01G313300.1 Wheat extracellular 59.61 62.3
TraesCS5D01G535500.1 Wheat extracellular 61.96 61.96
TraesCS3D01G313400.1 Wheat extracellular 60.39 61.85
TraesCS3D01G313200.1 Wheat extracellular 60.0 61.45
TraesCS3D01G175800.1 Wheat extracellular 60.39 61.35
CDY66063 Canola cytosol, extracellular, plastid 39.22 60.61
KRH51669 Soybean extracellular 57.25 57.94
TraesCS3D01G176000.1 Wheat extracellular 55.69 55.69
Bra016473.1-P Field mustard extracellular 35.29 52.94
Solyc07g063210.2.1 Tomato extracellular 46.67 46.48
TraesCS1D01G203100.1 Wheat extracellular 46.27 45.56
VIT_19s0014g02910.t01 Wine grape extracellular 45.1 44.75
TraesCS3D01G030100.1 Wheat extracellular 35.29 43.9
TraesCS7D01G314100.1 Wheat extracellular 43.14 42.64
AT3G15370.2 Thale cress extracellular 45.88 41.49
TraesCS7D01G019600.1 Wheat plastid 40.78 39.69
PGSC0003DMT400032334 Potato cytosol, nucleus, vacuole 46.27 26.52
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.1InterPro:Expan_Lol_pIInterPro:ExpansinInterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0009664
GO:GO:0009987GO:GO:0016043InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908
PFAM:PF01357PFAM:PF03330PRINTS:PR01225PRINTS:PR01226PFscan:PS50842PFscan:PS50843
PANTHER:PTHR31867PANTHER:PTHR31867:SF40InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590
SUPFAM:SSF50685SignalP:SignalP-noTMEnsemblPlantsGene:TraesCS5D01G527700EnsemblPlants:TraesCS5D01G527700.1SEG:seg:
Description
No Description!
Coordinates
chr5D:+:544799117..544799996
Molecular Weight (calculated)
27701.0 Da
IEP (calculated)
7.907
GRAVY (calculated)
0.070
Length
255 amino acids
Sequence
(BLAST)
001: MMVAGMRFLQ LFAVVLAFSF VPAKSGYWLP AHATFYGGAD GSDTMGGACG YENLYNAGYG INNAALSTAL FNNGLSCGQC YLITCDTSKS NMCKPGTSIT
101: VSATNFCPPN WALPSDNGGW CNPPRVHFDM SQPAWENLAI YRAGIVPVLY QQVACQRQGG LRFTINGFNY FELVLVTNMA GSGSVKSMSV KGTNTAWIPM
201: SQNWGANWQC LAGLKGQALS FAITSSGGQY KVFQDVVPAW WLFGQTFSTW QQFDY
Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)
001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
Arabidopsis Description
EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.