Factsheet for Zm00001d035108_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035101_P001	Maize	extracellular	83.07	99.53
Zm00001d035109_P001	Maize	extracellular	98.82	98.82
Zm00001d035102_P001	Maize	extracellular	98.82	98.82
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	82.28	98.58
Zm00001d035100_P001	Maize	extracellular	96.85	96.09
Zm00001d035112_P001	Maize	extracellular	76.77	95.59
Zm00001d035111_P001	Maize	extracellular	95.28	95.28
EES13271	Sorghum	extracellular	88.58	86.87
EES13270	Sorghum	extracellular	88.19	86.15
EES14433	Sorghum	plastid	87.4	79.86
TraesCS4D01G271800.1	Wheat	extracellular	72.83	74.3
HORVU4Hr1G072660.1	Barley	extracellular	73.62	73.91
TraesCS4B01G272600.1	Wheat	extracellular	73.23	73.52
TraesCS4D01G271900.1	Wheat	extracellular	72.83	73.12
TraesCS4D01G271700.1	Wheat	extracellular	72.83	73.12
TraesCS4B01G272800.1	Wheat	extracellular	72.83	73.12
TraesCS4A01G032600.1	Wheat	extracellular	72.83	73.12
TraesCS4B01G272700.1	Wheat	extracellular	72.44	72.73
Os03t0156000-00	Rice	extracellular	70.08	71.49
TraesCS5D01G527700.1	Wheat	extracellular	70.08	69.8
TraesCS1A01G406900.1	Wheat	extracellular	69.69	69.69
TraesCS4A01G345000.1	Wheat	extracellular	69.69	69.69
Os03t0156300-00	Rice	extracellular	65.75	69.58
Os03t0155900-01	Rice	extracellular	68.11	69.48
TraesCS5B01G528500.1	Wheat	extracellular	69.29	69.29
HORVU5Hr1G119860.2	Barley	extracellular	68.9	68.9
TraesCS1A01G406800.1	Wheat	extracellular	68.9	68.36
TraesCS5B01G528700.1	Wheat	extracellular	68.9	68.36
TraesCS5D01G527800.1	Wheat	extracellular	68.9	68.36
Zm00001d032885_P001	Maize	plastid	56.69	68.25
TraesCS4D01G270500.1	Wheat	extracellular	68.11	68.11
TraesCS4A01G345100.1	Wheat	extracellular	60.24	68.0
TraesCS4B01G271300.1	Wheat	extracellular	67.72	67.72
HORVU4Hr1G072580.1	Barley	extracellular	72.44	66.91
TraesCS4A01G034200.1	Wheat	extracellular	66.54	66.54
HORVU4Hr1G072440.1	Barley	extracellular	66.54	66.54
Zm00001d032884_P001	Maize	extracellular	63.78	64.29
HORVU5Hr1G119670.1	Barley	extracellular	70.08	63.35
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	43.31	63.22
Zm00001d032886_P001	Maize	extracellular	62.6	63.1
HORVU5Hr1G119680.4	Barley	extracellular	69.69	62.54
Zm00001d032882_P001	Maize	extracellular	61.02	60.31
CDY66063	Canola	cytosol, extracellular, plastid	38.19	58.79
Zm00001d040249_P001	Maize	extracellular	54.33	54.76
KRH51669	Soybean	extracellular	53.54	53.97
Zm00001d032883_P001	Maize	extracellular	62.2	53.92
Bra016473.1-P	Field mustard	extracellular	35.83	53.53
Zm00001d040247_P001	Maize	extracellular	52.76	46.85
Solyc07g063210.2.1	Tomato	extracellular	46.85	46.48
Zm00001d047353_P001	Maize	extracellular	45.28	44.57
VIT_19s0014g02910.t01	Wine grape	extracellular	43.31	42.8
AT3G15370.2	Thale cress	extracellular	46.46	41.84
Zm00001d035083_P001	Maize	extracellular	43.31	39.71
Zm00001d045571_P001	Maize	extracellular	41.73	38.97
Zm00001d006399_P001	Maize	extracellular	36.61	35.91
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	46.06	26.29

Protein Annotations

EntrezGene:103628991	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6LEI2	ProteinID:AQK78356.1
InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0002210959	EnsemblPlantsGene:Zm00001d035108	EnsemblPlants:Zm00001d035108_P001
EnsemblPlants:Zm00001d035108_T001	:	:	:	:	:

Description

Expansin-A11

Coordinates

chr6:-:5626198..5627048

Molecular Weight (calculated)

27513.4 Da

IEP (calculated)

6.323

GRAVY (calculated)

0.007

Length

254 amino acids

Sequence
(BLAST)

001: MGKHFLHQLL AVALALFVSP TRSDDWLPAT ATFYGGADGS DTMGGACGYG DLYEQGYGVN NAALSTALFN DGASCGQCYV IRCDSSKTGW CKPGSSNFAV
101: VSATNFCPPN WELPNGGWCG PPRPHFDMSQ PAWETIGIYS AGIIPVLYQR VKCWRSGGVR FTIAGFDHFY MVLITNVAGS GSIQSMAVKG ANTDWIPMYR
201: NWGANWHCLA GGLIGQGLSF ALVSTGGQNI VFQDVVPAWW QFGQTFNTYQ NFDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.