Factsheet for Zm00001d032883_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032885_P001	Maize	plastid	66.21	91.94
Zm00001d032884_P001	Maize	extracellular	74.4	86.51
EER94181	Sorghum	extracellular, plastid, vacuole	80.89	81.44
Zm00001d032882_P001	Maize	extracellular	67.24	76.65
Zm00001d032886_P001	Maize	extracellular	65.87	76.59
Os03t0428700-01	Rice	extracellular	59.04	67.58
TraesCS1B01G156700.1	Wheat	extracellular	58.02	67.46
Zm00001d035101_P001	Maize	extracellular	48.46	66.98
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	47.78	66.04
Zm00001d035111_P001	Maize	extracellular	55.63	64.17
Zm00001d035102_P001	Maize	extracellular	54.27	62.6
Zm00001d035100_P001	Maize	extracellular	54.61	62.5
Zm00001d035108_P001	Maize	extracellular	53.92	62.2
Os10t0439100-00	Rice	extracellular	53.92	61.96
Zm00001d035109_P001	Maize	extracellular	53.58	61.81
CDY66063	Canola	cytosol, extracellular, plastid	33.79	60.0
Zm00001d035112_P001	Maize	extracellular	41.3	59.31
Zm00001d040249_P001	Maize	extracellular	48.12	55.95
Bra016473.1-P	Field mustard	extracellular	29.69	51.18
KRH51669	Soybean	extracellular	43.69	50.79
Zm00001d040247_P001	Maize	extracellular	48.12	49.3
Zm00001d047353_P001	Maize	extracellular	41.98	47.67
VIT_19s0014g02910.t01	Wine grape	extracellular	39.25	44.75
Solyc07g063210.2.1	Tomato	extracellular	38.91	44.53
AT3G15370.2	Thale cress	extracellular	38.57	40.07
Zm00001d035083_P001	Maize	extracellular	35.49	37.55
Zm00001d045571_P001	Maize	extracellular	34.47	37.13
Zm00001d006399_P001	Maize	extracellular	30.72	34.75
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	38.91	25.62

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6KUP4	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
ProteinID:ONM06284.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF14	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	TMHMM:TMhelix	UniParc:UPI0002217FD7	EnsemblPlantsGene:Zm00001d032883	EnsemblPlants:Zm00001d032883_P001
EnsemblPlants:Zm00001d032883_T001	SEG:seg	:	:	:	:

Description

Expansin-A11

Coordinates

chr1:-:241396118..241397644

Molecular Weight (calculated)

30746.6 Da

IEP (calculated)

7.580

GRAVY (calculated)

0.181

Length

293 amino acids

Sequence
(BLAST)

001: MSTGLLYLSS GSIPMPCIIP AANILIGHLA HLLPKTHTFS LSEMASSFML CTVVVAACLA AAAADWSQGT ATFYGGVDAS GTMGGACGYD NLYNAGYGVN
101: TAALSPTLFN DGASCGQCYL ITCDGTRPGG QYCKPGNSIT VSATNLCPAN YALPNGGWCG PGRPHFDMSQ PAWENIGIFG GGIIPVLYQQ VKCSRTGGVR
201: FGLAGSQYFL LVNIQNLGGS GSVGAAWVKG DRTNWIQMSR NWGANWQALA GLVGQGLSFA VSTTGGQYIQ FWNVAPGWWQ FGQTFGTNLN FYY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.