Factsheet for Zm00001d032885_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032884_P001	Maize	extracellular	97.63	81.75
EER91570	Sorghum	extracellular	92.42	77.69
Zm00001d035101_P001	Maize	extracellular	68.25	67.92
Zm00001d032886_P001	Maize	extracellular	81.04	67.86
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	67.3	66.98
Zm00001d032883_P001	Maize	extracellular	91.94	66.21
Zm00001d032882_P001	Maize	extracellular	80.09	65.76
Os03t0428700-01	Rice	extracellular	71.56	58.98
TraesCS1B01G156700.1	Wheat	extracellular	70.14	58.73
Zm00001d035111_P001	Maize	extracellular	69.67	57.87
Zm00001d035108_P001	Maize	extracellular	68.25	56.69
Zm00001d035102_P001	Maize	extracellular	68.25	56.69
Zm00001d035100_P001	Maize	extracellular	68.72	56.64
Zm00001d035109_P001	Maize	extracellular	67.77	56.3
Zm00001d035112_P001	Maize	extracellular	54.03	55.88
Os10t0439100-00	Rice	extracellular	66.35	54.9
CDY66063	Canola	cytosol, extracellular, plastid	38.86	49.7
Zm00001d040249_P001	Maize	extracellular	57.82	48.41
Zm00001d040247_P001	Maize	extracellular	60.66	44.76
KRH51669	Soybean	extracellular	52.13	43.65
Zm00001d047353_P001	Maize	extracellular	52.61	43.02
Bra016473.1-P	Field mustard	extracellular	32.7	40.59
Solyc07g063210.2.1	Tomato	extracellular	48.82	40.23
VIT_19s0014g02910.t01	Wine grape	extracellular	47.39	38.91
AT3G15370.2	Thale cress	extracellular	47.87	35.82
Zm00001d045571_P001	Maize	extracellular	43.13	33.46
Zm00001d035083_P001	Maize	extracellular	42.65	32.49
Zm00001d006399_P001	Maize	extracellular	36.02	29.34
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	48.34	22.92

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6KUP6	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	ProteinID:ONM06286.1
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF14	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	UniParc:UPI0002215080	EnsemblPlantsGene:Zm00001d032885	EnsemblPlants:Zm00001d032885_P001	EnsemblPlants:Zm00001d032885_T001	:

Description

Expansin-A11

Coordinates

chr1:+:241441141..241441879

Molecular Weight (calculated)

22470.3 Da

IEP (calculated)

8.189

GRAVY (calculated)

-0.085

Length

211 amino acids

Sequence
(BLAST)

001: MGGACGYDNL YNAGYGVNNA ALSATLFNDG ASCGQCYLIT CDTSRPGGQS CKPGSSITVS ATNLCPANYA LPNGGWCGPG RPHFDMSQPA WEHIGIYGAG
101: VIPVLYQQVK CSRSGGVRFS LAGSQYFLLV NVQNLGGSGS VGAAWVKGDR TNWIQMSRNW GANWHALAGL VGQGLSFAVT TTGGQYIQFW NVAPGWWQFG
201: QTYTTNLNFY Y

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.