Factsheet for Zm00001d035101_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	98.11	98.11
Zm00001d035102_P001	Maize	extracellular	100.0	83.46
Zm00001d035108_P001	Maize	extracellular	99.53	83.07
Zm00001d035109_P001	Maize	extracellular	98.11	81.89
Zm00001d035112_P001	Maize	extracellular	77.83	80.88
Zm00001d035100_P001	Maize	extracellular	97.64	80.86
Zm00001d035111_P001	Maize	extracellular	95.75	79.92
EES13271	Sorghum	extracellular	87.74	71.81
EES13270	Sorghum	extracellular	87.26	71.15
Zm00001d032885_P001	Maize	plastid	67.92	68.25
EES14433	Sorghum	plastid	86.79	66.19
TraesCS4D01G271800.1	Wheat	extracellular	75.94	64.66
HORVU4Hr1G072660.1	Barley	extracellular	75.94	63.64
TraesCS4D01G271700.1	Wheat	extracellular	75.47	63.24
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	51.89	63.22
TraesCS4D01G271900.1	Wheat	extracellular	75.0	62.85
TraesCS4B01G272800.1	Wheat	extracellular	75.0	62.85
TraesCS4B01G272600.1	Wheat	extracellular	75.0	62.85
TraesCS4A01G032600.1	Wheat	extracellular	75.0	62.85
TraesCS4B01G272700.1	Wheat	extracellular	74.53	62.45
Os03t0156000-00	Rice	extracellular	71.23	60.64
TraesCS5B01G528500.1	Wheat	extracellular	71.23	59.45
TraesCS1A01G406900.1	Wheat	extracellular	71.23	59.45
TraesCS4A01G345000.1	Wheat	extracellular	71.23	59.45
HORVU5Hr1G119860.2	Barley	extracellular	71.23	59.45
Os03t0155900-01	Rice	extracellular	69.81	59.44
TraesCS5D01G527700.1	Wheat	extracellular	71.23	59.22
TraesCS1A01G406800.1	Wheat	extracellular	71.23	58.98
TraesCS5D01G527800.1	Wheat	extracellular	71.23	58.98
Os03t0156300-00	Rice	extracellular	66.51	58.75
TraesCS4B01G271300.1	Wheat	extracellular	70.28	58.66
TraesCS4D01G270500.1	Wheat	extracellular	70.28	58.66
TraesCS5B01G528700.1	Wheat	extracellular	70.75	58.59
HORVU4Hr1G072580.1	Barley	extracellular	75.0	57.82
TraesCS4A01G034200.1	Wheat	extracellular	68.87	57.48
HORVU4Hr1G072440.1	Barley	extracellular	68.87	57.48
Zm00001d032884_P001	Maize	extracellular	67.45	56.75
TraesCS4A01G345100.1	Wheat	extracellular	59.91	56.44
Zm00001d032886_P001	Maize	extracellular	66.04	55.56
HORVU5Hr1G119670.1	Barley	extracellular	71.7	54.09
Zm00001d032882_P001	Maize	extracellular	65.09	53.7
HORVU5Hr1G119680.4	Barley	extracellular	71.23	53.36
CDY66063	Canola	cytosol, extracellular, plastid	41.04	52.73
Zm00001d032883_P001	Maize	extracellular	66.98	48.46
KRH51669	Soybean	extracellular	56.13	47.22
Zm00001d040249_P001	Maize	extracellular	55.66	46.83
Bra016473.1-P	Field mustard	extracellular	34.91	43.53
Solyc07g063210.2.1	Tomato	extracellular	51.42	42.58
Zm00001d040247_P001	Maize	extracellular	55.19	40.91
Zm00001d047353_P001	Maize	extracellular	47.64	39.15
VIT_19s0014g02910.t01	Wine grape	extracellular	47.17	38.91
AT3G15370.2	Thale cress	extracellular	50.0	37.59
Zm00001d035083_P001	Maize	extracellular	45.75	35.02
Zm00001d045571_P001	Maize	extracellular	44.81	34.93
Zm00001d006399_P001	Maize	extracellular	35.85	29.34
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	50.47	24.04

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6LEH8	ProteinID:AQK78352.1	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	UniParc:UPI0008447B41	EnsemblPlantsGene:Zm00001d035101	EnsemblPlants:Zm00001d035101_P001	EnsemblPlants:Zm00001d035101_T001	:

Description

Expansin-A11

Coordinates

chr6:-:5347184..5347899

Molecular Weight (calculated)

23082.3 Da

IEP (calculated)

6.712

GRAVY (calculated)

-0.016

Length

212 amino acids

Sequence
(BLAST)

001: MGGACGYGDL YEQGYGVNNA ALSMALFNDG ASCGQCYVIR CDSSKTGWCK PGSSNFAVVS ATNFCPPNWE LPNGGWCGPP RPHFDMSQPA WETIGIYSAG
101: IIPVLYQRVK CWRSGGVRFT IAGFDHFYMV LITNVAGSGS IQSMAVKGAN TDWIPMYRNW GANWHCLAGG LIGQGLSFAL VSTGGQNIVF QDVVPAWWQF
201: GQTFNTYQNF DY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.