Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G032600.1 | Wheat | extracellular | 96.84 | 96.84 |
| TraesCS4D01G271700.1 | Wheat | extracellular | 96.44 | 96.44 |
| TraesCS4B01G272800.1 | Wheat | extracellular | 96.05 | 96.05 |
| TraesCS4D01G271900.1 | Wheat | extracellular | 96.05 | 96.05 |
| HORVU4Hr1G072660.1 | Barley | extracellular | 95.65 | 95.65 |
| TraesCS4B01G272600.1 | Wheat | extracellular | 94.86 | 94.86 |
| TraesCS4D01G271800.1 | Wheat | extracellular | 92.49 | 93.98 |
| HORVU4Hr1G072580.1 | Barley | extracellular | 94.86 | 87.27 |
| TraesCS5B01G528700.1 | Wheat | extracellular | 84.19 | 83.2 |
| TraesCS5B01G528500.1 | Wheat | extracellular | 83.4 | 83.07 |
| TraesCS4B01G271300.1 | Wheat | extracellular | 80.63 | 80.31 |
| TraesCS5B01G528600.1 | Wheat | extracellular, plastid, vacuole | 52.96 | 77.01 |
| Zm00001d035104_P001 | Maize | cytosol, extracellular, plastid | 62.45 | 74.53 |
| Zm00001d035101_P001 | Maize | extracellular | 62.45 | 74.53 |
| Zm00001d035111_P001 | Maize | extracellular | 73.52 | 73.23 |
| TraesCS1B01G156700.1 | Wheat | extracellular | 72.73 | 73.02 |
| Zm00001d035102_P001 | Maize | extracellular | 72.73 | 72.44 |
| Zm00001d035108_P001 | Maize | extracellular | 72.73 | 72.44 |
| Zm00001d035100_P001 | Maize | extracellular | 72.73 | 71.88 |
| EES13271 | Sorghum | extracellular | 73.52 | 71.81 |
| Zm00001d035109_P001 | Maize | extracellular | 71.94 | 71.65 |
| EES13270 | Sorghum | extracellular | 72.73 | 70.77 |
| Zm00001d035112_P001 | Maize | extracellular | 56.92 | 70.59 |
| EES14433 | Sorghum | plastid | 73.52 | 66.91 |
| CDY66063 | Canola | cytosol, extracellular, plastid | 38.34 | 58.79 |
| TraesCS5B01G548500.1 | Wheat | extracellular | 58.89 | 58.43 |
| TraesCS3B01G347900.1 | Wheat | extracellular | 57.31 | 58.23 |
| TraesCS3B01G348000.1 | Wheat | extracellular | 56.92 | 57.83 |
| TraesCS3B01G199900.1 | Wheat | extracellular | 57.31 | 57.77 |
| KRH51669 | Soybean | extracellular | 56.92 | 57.14 |
| TraesCS3B01G200100.1 | Wheat | extracellular | 54.94 | 54.51 |
| TraesCS5B01G528400.1 | Wheat | extracellular | 36.76 | 53.45 |
| Bra016473.1-P | Field mustard | extracellular | 34.39 | 51.18 |
| Solyc07g063210.2.1 | Tomato | extracellular | 45.85 | 45.31 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 41.9 | 42.74 |
| AT3G15370.2 | Thale cress | extracellular | 47.04 | 42.2 |
| VIT_19s0014g02910.t01 | Wine grape | extracellular | 42.69 | 42.02 |
| TraesCS1B01G214200.1 | Wheat | extracellular | 43.08 | 41.76 |
| TraesCS1B01G214300.1 | Wheat | extracellular | 43.08 | 41.76 |
| TraesCS7B01G293800.1 | Wheat | extracellular | 21.34 | 26.87 |
| PGSC0003DMT400032334 | Potato | cytosol, nucleus, vacuole | 45.06 | 25.62 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0009664 |
| GO:GO:0009987 | GO:GO:0016043 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31867 | PANTHER:PTHR31867:SF40 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 |
| SUPFAM:SSF50685 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS4B01G272700 | EnsemblPlants:TraesCS4B01G272700.1 | : | : |
Description
No Description!
Coordinates
chr4B:-:550486865..550487953
Molecular Weight (calculated)
27747.7 Da
IEP (calculated)
6.854
GRAVY (calculated)
-0.014
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGMRYLHL FADVLAFCFT PANSNWIPAT ATFYGGADGS DTMGGACGYE NLYVAGYGIN NVALSTALFN DGASCGQCYV IICDTSKSEM CKPGTSITVS
101: ATNFCPPNWD PPSDNGRWCN PPRHHFDMSQ PAWENIGIYR AGIIPVFYQQ VKCWRQGGVR FTINGFNYFE LVLVANIGGS GSIKSMSVKG TNTAWIPMSR
201: NWGANWHCLS GLVGQALSFA ITSTGGQYLV FQDVVPAWWQ FGQTFSTWRQ FDY
101: ATNFCPPNWD PPSDNGRWCN PPRHHFDMSQ PAWENIGIYR AGIIPVFYQQ VKCWRQGGVR FTINGFNYFE LVLVANIGGS GSIKSMSVKG TNTAWIPMSR
201: NWGANWHCLS GLVGQALSFA ITSTGGQYLV FQDVVPAWWQ FGQTFSTWRQ FDY
001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
Arabidopsis Description
EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.