CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
golgi 1
extracellular 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13271	Sorghum	extracellular	91.73	98.46
EES13270	Sorghum	extracellular	91.01	97.31
Zm00001d035112_P001	Maize	extracellular	65.47	89.22
Zm00001d035111_P001	Maize	extracellular	80.58	88.19
Zm00001d035102_P001	Maize	extracellular	80.22	87.8
Zm00001d035108_P001	Maize	extracellular	79.86	87.4
Zm00001d035100_P001	Maize	extracellular	80.22	87.11
Zm00001d035101_P001	Maize	extracellular	66.19	86.79
Zm00001d035109_P001	Maize	extracellular	78.78	86.22
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	65.47	85.85
TraesCS4D01G271800.1	Wheat	extracellular	67.27	75.1
HORVU4Hr1G072660.1	Barley	extracellular	68.35	75.1
TraesCS4B01G272600.1	Wheat	extracellular	67.99	74.7
TraesCS4D01G271700.1	Wheat	extracellular	67.63	74.31
TraesCS4D01G271900.1	Wheat	extracellular	67.63	74.31
TraesCS4A01G032600.1	Wheat	extracellular	67.27	73.91
TraesCS4B01G272800.1	Wheat	extracellular	67.27	73.91
TraesCS4B01G272700.1	Wheat	extracellular	66.91	73.52
Os03t0156000-00	Rice	extracellular	64.03	71.49
Os03t0155900-01	Rice	extracellular	62.95	70.28
TraesCS5D01G527700.1	Wheat	extracellular	63.67	69.41
TraesCS4A01G345000.1	Wheat	extracellular	63.31	69.29
TraesCS1A01G406900.1	Wheat	extracellular	63.31	69.29
Os03t0156300-00	Rice	extracellular	59.71	69.17
TraesCS1A01G406800.1	Wheat	extracellular	63.67	69.14
TraesCS5B01G528500.1	Wheat	extracellular	62.95	68.9
TraesCS4A01G345100.1	Wheat	extracellular	55.76	68.89
HORVU5Hr1G119860.2	Barley	extracellular	62.59	68.5
TraesCS5D01G527800.1	Wheat	extracellular	62.95	68.36
TraesCS5B01G528700.1	Wheat	extracellular	62.95	68.36
HORVU4Hr1G072580.1	Barley	extracellular	66.91	67.64
TraesCS4D01G270500.1	Wheat	extracellular	60.79	66.54
TraesCS4B01G271300.1	Wheat	extracellular	60.43	66.14
TraesCS4A01G034200.1	Wheat	extracellular	60.07	65.75
EER91570	Sorghum	extracellular	59.35	65.74
HORVU4Hr1G072440.1	Barley	extracellular	59.35	64.96
KXG38462	Sorghum	extracellular	57.55	63.24
HORVU5Hr1G119670.1	Barley	extracellular	63.67	62.99
HORVU5Hr1G119680.4	Barley	extracellular	63.31	62.19
EER94179	Sorghum	extracellular	56.47	62.06
EER91571	Sorghum	extracellular	56.12	61.66
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	38.13	60.92
CDY66063	Canola	cytosol, extracellular, plastid	33.09	55.76
EER94181	Sorghum	extracellular, plastid, vacuole	57.55	54.98
KRH51669	Soybean	extracellular	48.56	53.57
EES02419	Sorghum	extracellular	47.48	52.17
EES02683	Sorghum	extracellular	47.12	51.57
Bra016473.1-P	Field mustard	extracellular	31.3	51.18
Solyc07g063210.2.1	Tomato	extracellular	41.73	45.31
EER94586	Sorghum	extracellular	41.01	43.18
KXG29998	Sorghum	extracellular	29.14	42.63
EES14420	Sorghum	extracellular	39.57	41.35
VIT_19s0014g02910.t01	Wine grape	extracellular	38.13	41.25
AT3G15370.2	Thale cress	extracellular	40.65	40.07
EER89054	Sorghum	extracellular	37.41	37.68
KXG36242	Sorghum	extracellular	33.81	34.56
KXG32172	Sorghum	extracellular	28.78	30.19
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	41.01	25.62

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EntrezGene:8074015	UniProt:C5YMD6	EnsemblPlants:EES14433
ProteinID:EES14433	ProteinID:EES14433.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	EnsemblPlantsGene:SORBI_3007G019900	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
UniParc:UPI0001A87990	RefSeq:XP_002444938.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:1855603..1856772

Molecular Weight (calculated)

30054.6 Da

IEP (calculated)

7.590

GRAVY (calculated)

0.022

Length

278 amino acids

Sequence
(BLAST)

001: MSTVSTYISS SCSQPFPSKM GKRFLHQLLA VVLALFLSPA RSGDWLPATA TFYGGADGSD TMGGACGYSD LYEQGYGINN AALSTALFND GASCGQCYVI
101: ICDSSKTRWC KPGNNWVVVS ATNFCPPNWD LPAVGDLPAG GWCAPPRPHF DMSQPAWENI GIYSAGVINV LYQRVKCWKS GGVRFTMAGF NGFYMVLVTN
201: VAGSGSIQSM AVKGNSTDWI PMYRNWGANW HCLSGGLVGQ GLSFALVSTG GQNLVFKDVV PAWWQFGQTY TTYQNFDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.