Factsheet for Os03t0155900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0156000-00	Rice	extracellular	89.56	89.56
Os03t0156300-00	Rice	extracellular	85.54	88.75
HORVU4Hr1G072660.1	Barley	extracellular	73.09	71.94
TraesCS4A01G032600.1	Wheat	extracellular	73.09	71.94
TraesCS4D01G271800.1	Wheat	extracellular	71.89	71.89
TraesCS4D01G271900.1	Wheat	extracellular	72.69	71.54
TraesCS1A01G406900.1	Wheat	extracellular	72.69	71.26
TraesCS4A01G345000.1	Wheat	extracellular	72.69	71.26
TraesCS5D01G527700.1	Wheat	extracellular	72.29	70.59
HORVU5Hr1G119860.2	Barley	extracellular	71.89	70.47
TraesCS4D01G271700.1	Wheat	extracellular	71.49	70.36
TraesCS4A01G345100.1	Wheat	extracellular	63.45	70.22
Os03t0428700-01	Rice	extracellular	71.89	69.92
Zm00001d035101_P001	Maize	extracellular	59.44	69.81
TraesCS1A01G406800.1	Wheat	extracellular	71.49	69.53
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	59.04	69.34
TraesCS5D01G527800.1	Wheat	extracellular	71.08	69.14
TraesCS4D01G270500.1	Wheat	extracellular	70.28	68.9
TraesCS4A01G034200.1	Wheat	extracellular	69.88	68.5
Zm00001d035111_P001	Maize	extracellular	69.88	68.5
Os10t0439100-00	Rice	extracellular	69.88	68.24
HORVU4Hr1G072440.1	Barley	extracellular	69.48	68.11
Zm00001d035108_P001	Maize	extracellular	69.48	68.11
Zm00001d035102_P001	Maize	extracellular	69.48	68.11
EES13271	Sorghum	extracellular	70.28	67.57
Zm00001d035109_P001	Maize	extracellular	68.67	67.32
Zm00001d035100_P001	Maize	extracellular	69.08	67.19
EES13270	Sorghum	extracellular	69.08	66.15
Zm00001d035112_P001	Maize	extracellular	53.41	65.2
HORVU5Hr1G119670.1	Barley	extracellular	72.69	64.41
HORVU4Hr1G072580.1	Barley	extracellular	71.08	64.36
EES14433	Sorghum	plastid	70.28	62.95
HORVU5Hr1G119680.4	Barley	extracellular	71.49	62.9
Os06t0718100-01	Rice	plastid	61.85	58.56
Os01t0248900-01	Rice	extracellular	57.83	57.37
KRH51669	Soybean	extracellular	57.83	57.14
Os05t0276500-01	Rice	extracellular	57.83	56.47
Os01t0249100-00	Rice	extracellular	49.4	56.42
CDY66063	Canola	cytosol, extracellular, plastid	37.35	56.36
Os05t0277000-00	Rice	extracellular	53.01	53.23
Bra016473.1-P	Field mustard	extracellular	33.33	48.82
Solyc07g063210.2.1	Tomato	extracellular	49.0	47.66
Os10t0535900-00	Rice	extracellular	49.0	45.86
TraesCS5B01G528400.1	Wheat	extracellular	31.33	44.83
VIT_19s0014g02910.t01	Wine grape	extracellular	44.18	42.8
AT3G15370.2	Thale cress	extracellular	47.79	42.2
Os06t0108600-00	Rice	extracellular	39.36	36.57
Os12t0546800-01	Rice	plasma membrane	36.95	31.72
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	49.0	27.42

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EntrezGene:4331666	ProteinID:AAL24489.1	ProteinID:AAM51841.1
ProteinID:ABF94055.1	EMBL:AK243246	ProteinID:BAS82363.1	EMBL:DQ061059	ProteinID:EAZ25633.1	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	GO:GO:0071555	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	EnsemblPlantsGene:Os03g0155900	EnsemblPlants:Os03t0155900-01	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	UniProt:Q4PR48
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
UniParc:UPI00000ABD9F	RefSeq:XP_015629343.1	SEG:seg	:	:	:

Description

ALPHA-EXPANSIN 18Alpha-expansin OsEXPA18. (Os03t0155900-01)

Coordinates

chr3:+:3021246..3022564

Molecular Weight (calculated)

26432.4 Da

IEP (calculated)

6.920

GRAVY (calculated)

0.136

Length

249 amino acids

Sequence
(BLAST)

001: MGNIVLQLLA ILALCIAPAR SGWLQGTATF YGGADGSGTM GGACGYGNLY DQGYGINNAA LSTPLFNNGA SCGQCYLIIC NYDKAPSGCR MGTAITVTGT
101: NFCPPNYDLP YGGWCNTTRP HFDMSQPAWE NIGIYSAGIV PILYQQVKCW RSGGVRFTIT GLNYFELVLV TNMAGSGSIA SMSVKGSSTG WIQMSRNWGA
201: NWQCLAGLAG QALSFTVTST GGQTIVFDSV VPAGWSFGQT FSTYQQFDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.