Factsheet for HORVU5Hr1G119860.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G528700.1	Wheat	extracellular	97.24	96.48
TraesCS4A01G345000.1	Wheat	extracellular	95.28	95.28
TraesCS1A01G406900.1	Wheat	extracellular	95.28	95.28
TraesCS5D01G527800.1	Wheat	extracellular	95.67	94.92
TraesCS5D01G527700.1	Wheat	extracellular	95.28	94.9
TraesCS5B01G528500.1	Wheat	extracellular	94.49	94.49
TraesCS1A01G406800.1	Wheat	extracellular	94.09	93.36
TraesCS4A01G345100.1	Wheat	extracellular	80.71	91.11
HORVU5Hr1G119670.1	Barley	extracellular	98.03	88.61
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	60.24	87.93
HORVU4Hr1G072440.1	Barley	extracellular	87.8	87.8
HORVU4Hr1G072660.1	Barley	extracellular	86.61	86.96
HORVU5Hr1G119680.4	Barley	extracellular	96.46	86.57
HORVU4Hr1G072580.1	Barley	extracellular	84.65	78.18
Os03t0156000-00	Rice	extracellular	70.47	71.89
Os03t0155900-01	Rice	extracellular	70.47	71.89
Zm00001d035101_P001	Maize	extracellular	59.45	71.23
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	59.06	70.75
Os03t0156300-00	Rice	extracellular	66.54	70.42
Zm00001d035111_P001	Maize	extracellular	69.69	69.69
Zm00001d035102_P001	Maize	extracellular	68.9	68.9
Zm00001d035108_P001	Maize	extracellular	68.9	68.9
Zm00001d035109_P001	Maize	extracellular	68.11	68.11
Zm00001d035100_P001	Maize	extracellular	68.5	67.97
EES13271	Sorghum	extracellular	68.5	67.18
Zm00001d035112_P001	Maize	extracellular	53.54	66.67
EES13270	Sorghum	extracellular	67.72	66.15
EES14433	Sorghum	plastid	68.5	62.59
HORVU3Hr1G076620.1	Barley	extracellular	60.63	61.85
HORVU3Hr1G076670.1	Barley	extracellular	60.24	61.45
HORVU3Hr1G076640.2	Barley	extracellular	59.84	61.04
CDY66063	Canola	cytosol, extracellular, plastid	39.37	60.61
HORVU5Hr1G121370.1	Barley	extracellular	60.63	60.39
KRH51669	Soybean	extracellular	57.87	58.33
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	59.06	52.63
Bra016473.1-P	Field mustard	extracellular	35.04	52.35
HORVU3Hr1G076630.1	Barley	extracellular	45.67	52.02
HORVU0Hr1G032890.2	Barley	extracellular	38.19	47.55
Solyc07g063210.2.1	Tomato	extracellular	47.24	46.88
HORVU1Hr1G036910.1	Barley	extracellular	22.05	45.53
VIT_19s0014g02910.t01	Wine grape	extracellular	44.09	43.58
HORVU7Hr1G075680.1	Barley	extracellular	42.52	41.86
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	23.62	41.1
AT3G15370.2	Thale cress	extracellular	44.88	40.43
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	23.23	39.6
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	40.55	30.93
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	33.86	28.67
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	46.46	26.52
HORVU1Hr1G051590.1	Barley	plastid	18.11	15.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312
EnsemblPlantsGene:HORVU5Hr1G119860	EnsemblPlants:HORVU5Hr1G119860.2	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
UniProt:M0ZDW2	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000295A109	:	:

Description

No Description!

Coordinates

chrchr5H:-:656695435..656696557

Molecular Weight (calculated)

27664.8 Da

IEP (calculated)

7.565

GRAVY (calculated)

0.030

Length

254 amino acids

Sequence
(BLAST)

001: MAAGMRFLQM FTAVLAFCFT PAKSGYWLPA HATFYGGADG SDTMGGACGY ENLYNAGYGI NNAALSTALF NNGLSCGQCY LITCDTSRSD MCKPGTSITV
101: SATNFCPPNW ALPSDNGGWC NPPRVHFDMS QPAWENLAIY RAGIVPVLYQ QVACQRQGGL RFTINGFNYF ELVLVTNIAM SGSIKSMSVK GTNTAWIPMS
201: QNWGANWQCL AGLKGQGLSF AITSSGGQYK VFQDVVPAWW LFGQTFSTWQ QFDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.