Factsheet for HORVU1Hr1G036910.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025800.1-P	Field mustard	cytosol, extracellular, plastid	32.52	63.49
CDY44426	Canola	extracellular	36.59	37.19
HORVU0Hr1G032890.2	Barley	extracellular	42.28	25.49
HORVU3Hr1G076630.1	Barley	extracellular	44.72	24.66
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	29.27	24.66
TraesCS7B01G293800.1	Wheat	extracellular	39.02	23.88
HORVU3Hr1G076620.1	Barley	extracellular	47.97	23.69
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	28.46	23.49
HORVU3Hr1G076640.2	Barley	extracellular	47.15	23.29
HORVU3Hr1G076670.1	Barley	extracellular	47.15	23.29
HORVU5Hr1G121370.1	Barley	extracellular	47.15	22.75
HORVU4Hr1G072660.1	Barley	extracellular	45.53	22.13
HORVU5Hr1G119860.2	Barley	extracellular	45.53	22.05
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	49.59	21.4
HORVU4Hr1G072440.1	Barley	extracellular	42.28	20.47
HORVU4Hr1G072580.1	Barley	extracellular	43.9	19.64
HORVU5Hr1G119670.1	Barley	extracellular	44.72	19.57
HORVU5Hr1G119680.4	Barley	extracellular	44.72	19.43
HORVU7Hr1G075680.1	Barley	extracellular	40.65	19.38
KXG32172	Sorghum	extracellular	40.65	18.87
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	36.59	13.51
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	30.89	12.67
HORVU1Hr1G051590.1	Barley	plastid	21.14	8.67

Protein Annotations

EnsemblPlants:HORVU1Hr1G036910.1	EnsemblPlantsGene:HORVU1Hr1G036910	Gene3D:2.40.40.10	GO:GO:0005575	GO:GO:0005576	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:IPR007112	InterPro:IPR036908	InterPro:RlpA-like_sf	PANTHER:PTHR31867	PANTHER:PTHR31867:SF20
PFscan:PS50842	PRINTS:PR01225	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF50685	TMHMM:TMhelix
UniParc:UPI000B4645E0	UniProt:A0A287F576	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:249645375..249646267

Molecular Weight (calculated)

12398.5 Da

IEP (calculated)

9.298

GRAVY (calculated)

-0.024

Length

123 amino acids

Sequence
(BLAST)

001: MTMEASKSLA AFVAILTTLL AAPAYAGWST GSATFYGGSD ASGTMGGACG YGNLYSTGYG TNTAALSSAM FSDGASCGQC FQIAGRAPPS QSRPPTFARP
101: TTRCPATTAA GATRRVRTST WPS

Best Arabidopsis Sequence Match ( AT2G28950.1 )
(BLAST)

001: MAMLGLVLSV LTTILALSEA RIPGVYNGGG WETAHATFYG GSDASGTMGG ACGYGNLYSQ GYGVNTAALS TALFNNGFSC GACFELKCAS DPKWCHSGSP
101: SIFITATNFC PPNFAQPSDN GGWCNPPRPH FDLAMPMFLK IAEYRAGIVP VSFRRVPCRK RGGIRFTING FRYFNLVLVT NVAGAGNIVR LGVKGTHTSW
201: MTMSRNWGQN WQSNSVLVGQ SLSFRVTSSD RRSSTSWNIA PANWKFGQTF MGKNFRV

Arabidopsis Description

EXPA6EXPA6 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.