Factsheet for HORVU4Hr1G072660.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G032600.1	Wheat	extracellular	98.02	98.02
TraesCS4B01G272600.1	Wheat	extracellular	97.23	97.23
TraesCS4D01G271700.1	Wheat	extracellular	97.23	97.23
TraesCS4D01G271900.1	Wheat	extracellular	97.23	97.23
TraesCS4B01G272800.1	Wheat	extracellular	97.23	97.23
TraesCS4D01G271800.1	Wheat	extracellular	94.47	95.98
TraesCS4B01G272700.1	Wheat	extracellular	95.65	95.65
HORVU4Hr1G072580.1	Barley	extracellular	98.02	90.18
HORVU5Hr1G119860.2	Barley	extracellular	86.96	86.61
HORVU4Hr1G072440.1	Barley	extracellular	80.24	79.92
HORVU5Hr1G119670.1	Barley	extracellular	88.14	79.36
HORVU5Hr1G119680.4	Barley	extracellular	85.38	76.33
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	63.64	75.94
Zm00001d035101_P001	Maize	extracellular	63.64	75.94
Os03t0156000-00	Rice	extracellular	74.31	75.5
Zm00001d035111_P001	Maize	extracellular	75.1	74.8
Zm00001d035102_P001	Maize	extracellular	73.91	73.62
Zm00001d035108_P001	Maize	extracellular	73.91	73.62
Zm00001d035100_P001	Maize	extracellular	74.31	73.44
EES13271	Sorghum	extracellular	75.1	73.36
Os03t0155900-01	Rice	extracellular	71.94	73.09
Os03t0156300-00	Rice	extracellular	69.17	72.92
Zm00001d035109_P001	Maize	extracellular	73.12	72.83
Zm00001d035112_P001	Maize	extracellular	58.5	72.55
EES13270	Sorghum	extracellular	74.31	72.31
EES14433	Sorghum	plastid	75.1	68.35
HORVU3Hr1G076670.1	Barley	extracellular	59.68	60.64
HORVU3Hr1G076620.1	Barley	extracellular	59.68	60.64
HORVU3Hr1G076640.2	Barley	extracellular	59.29	60.24
CDY66063	Canola	cytosol, extracellular, plastid	39.13	60.0
HORVU5Hr1G121370.1	Barley	extracellular	59.68	59.22
KRH51669	Soybean	extracellular	57.71	57.94
Bra016473.1-P	Field mustard	extracellular	35.18	52.35
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	58.1	51.58
HORVU3Hr1G076630.1	Barley	extracellular	45.45	51.57
HORVU0Hr1G032890.2	Barley	extracellular	37.94	47.06
HORVU1Hr1G036910.1	Barley	extracellular	22.13	45.53
Solyc07g063210.2.1	Tomato	extracellular	45.85	45.31
HORVU7Hr1G075680.1	Barley	extracellular	43.87	43.02
VIT_19s0014g02910.t01	Wine grape	extracellular	42.69	42.02
AT3G15370.2	Thale cress	extracellular	46.25	41.49
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	22.92	39.73
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	22.53	38.26
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	37.94	28.83
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	32.81	27.67
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	45.06	25.62
HORVU1Hr1G051590.1	Barley	plastid	19.37	16.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A287PM35	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030312	EnsemblPlantsGene:HORVU4Hr1G072660	EnsemblPlants:HORVU4Hr1G072660.1	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000B466622	:	:

Description

No Description!

Coordinates

chrchr4H:+:586245141..586246232

Molecular Weight (calculated)

27608.7 Da

IEP (calculated)

7.189

GRAVY (calculated)

0.046

Length

253 amino acids

Sequence
(BLAST)

001: MAAGMRFLQL FAAVLAFCFA PAKSNWIPAT ATFYGGADGS DTMGGACGYE NLYNAGYGIN NVALSTALFN DGASCGQCYV IICDTSKSDM CKPGTSITVS
101: ATNFCPPNWD LPSDNGGWCN PPRHHFDMSQ PAWENIGIYR AGIIPVFYQQ VKCWRQGGVR FTINGFNYFE LVLVANIAGS GSIKSMSVKG TNTAWIPMSR
201: NWGANWHCLS GLVGQALSFA ITSTGGQYLV FQDVVPAWWQ FGQTFTTWRQ FDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.