CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13270	Sorghum	extracellular	97.68	97.31
EES14433	Sorghum	plastid	98.46	91.73
Zm00001d035112_P001	Maize	extracellular	70.66	89.71
Zm00001d035111_P001	Maize	extracellular	87.64	89.37
Zm00001d035102_P001	Maize	extracellular	87.26	88.98
Zm00001d035108_P001	Maize	extracellular	86.87	88.58
Zm00001d035100_P001	Maize	extracellular	87.26	88.28
Zm00001d035101_P001	Maize	extracellular	71.81	87.74
Zm00001d035109_P001	Maize	extracellular	85.71	87.4
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	71.04	86.79
TraesCS4D01G271800.1	Wheat	extracellular	72.2	75.1
HORVU4Hr1G072660.1	Barley	extracellular	73.36	75.1
TraesCS4B01G272600.1	Wheat	extracellular	72.59	74.31
TraesCS4D01G271700.1	Wheat	extracellular	72.59	74.31
TraesCS4A01G032600.1	Wheat	extracellular	72.2	73.91
TraesCS4D01G271900.1	Wheat	extracellular	72.2	73.91
TraesCS4B01G272700.1	Wheat	extracellular	71.81	73.52
TraesCS4B01G272800.1	Wheat	extracellular	71.81	73.52
Os03t0156000-00	Rice	extracellular	68.73	71.49
Os03t0155900-01	Rice	extracellular	67.57	70.28
TraesCS5D01G527700.1	Wheat	extracellular	68.34	69.41
TraesCS4A01G345000.1	Wheat	extracellular	67.95	69.29
TraesCS1A01G406900.1	Wheat	extracellular	67.95	69.29
Os03t0156300-00	Rice	extracellular	64.09	69.17
TraesCS5B01G528500.1	Wheat	extracellular	67.57	68.9
HORVU5Hr1G119860.2	Barley	extracellular	67.18	68.5
TraesCS5D01G527800.1	Wheat	extracellular	67.57	68.36
TraesCS1A01G406800.1	Wheat	extracellular	67.57	68.36
TraesCS5B01G528700.1	Wheat	extracellular	67.57	68.36
TraesCS4A01G345100.1	Wheat	extracellular	59.07	68.0
HORVU4Hr1G072580.1	Barley	extracellular	71.81	67.64
TraesCS4D01G270500.1	Wheat	extracellular	65.25	66.54
TraesCS4B01G271300.1	Wheat	extracellular	64.86	66.14
EER91570	Sorghum	extracellular	63.71	65.74
HORVU4Hr1G072440.1	Barley	extracellular	63.71	64.96
TraesCS4A01G034200.1	Wheat	extracellular	63.71	64.96
KXG38462	Sorghum	extracellular	62.16	63.64
HORVU5Hr1G119670.1	Barley	extracellular	68.34	62.99
EER94179	Sorghum	extracellular	61.0	62.45
EER91571	Sorghum	extracellular	61.0	62.45
HORVU5Hr1G119680.4	Barley	extracellular	67.95	62.19
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	41.31	61.49
CDY66063	Canola	cytosol, extracellular, plastid	36.29	56.97
EER94181	Sorghum	extracellular, plastid, vacuole	61.78	54.98
KRH51669	Soybean	extracellular	52.12	53.57
EES02419	Sorghum	extracellular	51.74	52.96
EES02683	Sorghum	extracellular	51.35	52.36
Bra016473.1-P	Field mustard	extracellular	34.36	52.35
Solyc07g063210.2.1	Tomato	extracellular	44.79	45.31
KXG29998	Sorghum	extracellular	31.27	42.63
EER94586	Sorghum	extracellular	43.24	42.42
VIT_19s0014g02910.t01	Wine grape	extracellular	41.7	42.02
EES14420	Sorghum	extracellular	41.7	40.6
AT3G15370.2	Thale cress	extracellular	43.63	40.07
EER89054	Sorghum	extracellular	39.38	36.96
KXG36242	Sorghum	extracellular	35.91	34.19
KXG32172	Sorghum	extracellular	30.89	30.19
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	44.02	25.62

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EntrezGene:8066109	UniProt:C5YME0	EnsemblPlants:EES13271
ProteinID:EES13271	ProteinID:EES13271.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	EnsemblPlantsGene:SORBI_3007G020200	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
UniParc:UPI0001A8777D	RefSeq:XP_002443776.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:1885830..1887792

Molecular Weight (calculated)

27989.1 Da

IEP (calculated)

6.713

GRAVY (calculated)

0.052

Length

259 amino acids

Sequence
(BLAST)

001: MGKRFLHQLL AVVLALFVSP ARSGDWLPAT ATFYGGADGS DTMGGACGYS DLYEQGYGIN NAALSTALFN DGASCGQCYV IICDSSKTQW CKPGNNWVVV
101: SATNFCPPNW DLPAVGDLPA GGWCAPPRPH FDMSQPAWEN IGIYSAGVIN VLYQRVKCWK SGGVRFTIAG FNGFYMVLIT NVAGSGSIQS MAVKGNSTDW
201: IPMYRNWGAN WHCLSGGLVG QGLSFALVST GGQNLVFKDV VPAWWQFGQT YTTYQNFDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.