CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

plastid 2
golgi 2
mitochondrion 1
extracellular 3
endoplasmic reticulum 1
vacuole 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91570	Sorghum	extracellular	76.63	88.84
KXG38462	Sorghum	extracellular	71.82	82.61
EER94179	Sorghum	extracellular	70.79	81.42
Zm00001d032883_P001	Maize	extracellular	81.44	80.89
EER91571	Sorghum	extracellular	67.7	77.87
Os03t0428700-01	Rice	extracellular	61.17	69.53
TraesCS1B01G156700.1	Wheat	extracellular	60.14	69.44
Os10t0439100-00	Rice	extracellular	55.33	63.14
EES13271	Sorghum	extracellular	54.98	61.78
EES13270	Sorghum	extracellular	54.3	60.77
CDY66063	Canola	cytosol, extracellular, plastid	33.68	59.39
EES14433	Sorghum	plastid	54.98	57.55
EES02419	Sorghum	extracellular	46.74	53.75
EES02683	Sorghum	extracellular	46.74	53.54
KRH51669	Soybean	extracellular	45.02	51.98
Bra016473.1-P	Field mustard	extracellular	29.9	51.18
EER94586	Sorghum	extracellular	43.3	47.73
Solyc07g063210.2.1	Tomato	extracellular	39.86	45.31
VIT_19s0014g02910.t01	Wine grape	extracellular	39.52	44.75
KXG29998	Sorghum	extracellular	27.49	42.11
AT3G15370.2	Thale cress	extracellular	39.52	40.78
EER89054	Sorghum	extracellular	36.43	38.41
EES14420	Sorghum	extracellular	32.99	36.09
KXG32172	Sorghum	extracellular	31.27	34.34
KXG36242	Sorghum	extracellular	31.27	33.46
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	39.18	25.62

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EntrezGene:8059326	UniProt:C5X0I2	EnsemblPlants:EER94181
ProteinID:EER94181	ProteinID:EER94181.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF14	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	EnsemblPlantsGene:SORBI_3001G238200	SUPFAM:SSF49590	SUPFAM:SSF50685	unigene:Sbi.546
UniParc:UPI0001A831EC	RefSeq:XP_002467183.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:24470313..24471749

Molecular Weight (calculated)

30919.5 Da

IEP (calculated)

7.826

GRAVY (calculated)

0.016

Length

291 amino acids

Sequence
(BLAST)

001: MHQTGLKHLH PHIPCLGTPN THPRSSILFS ICIQLSISND EMANSFMLCT VVVASCLAVA AAGWSQGTAT FYGGVDASGT MGGACGYDNL YNAGYGVNNA
101: ALGPTLFNDG ASCGQCYLIT CDTSRSGGQW CKPGNSITVS ATNLCPSNYA LPNGGWCGPG RPHFDMSQPA WEHIGIYSAG VVPVLYQQVK CSRTGGVRFS
201: LAGSQYFLLV NIQNLGGSGS VGAAWVKGDK TGWIQMSRNW GANWQALAGL VGQGLSFAVT TTGGQYIQFW NVVPGWWQFG QTYSTTQNFY Y

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.