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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, plastid
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016473.1-P Field mustard extracellular 81.21 78.82
CDY44069 Canola extracellular 49.7 52.56
CDY71742 Canola extracellular 63.64 52.24
CDY71009 Canola extracellular 63.64 52.24
TraesCS3A01G031700.1 Wheat extracellular 65.45 52.17
KRH51669 Soybean extracellular 69.09 45.24
CDY44426 Canola extracellular 32.12 43.8
TraesCS3D01G030100.1 Wheat extracellular 53.94 43.41
Os06t0718100-01 Rice plastid 69.09 43.35
CDY69805 Canola extracellular 40.0 42.86
TraesCS1B01G156700.1 Wheat extracellular 63.64 41.67
Zm00001d035101_P001 Maize extracellular 52.73 41.04
Zm00001d035104_P001 Maize cytosol, extracellular, plastid 52.73 41.04
TraesCS4D01G271800.1 Wheat extracellular 60.0 39.76
Zm00001d032886_P001 Maize extracellular 60.61 39.68
Os10t0439100-00 Rice extracellular 61.21 39.61
TraesCS4B01G272800.1 Wheat extracellular 60.61 39.53
TraesCS4A01G032600.1 Wheat extracellular 60.61 39.53
TraesCS4D01G271900.1 Wheat extracellular 60.61 39.53
EER91571 Sorghum extracellular 60.61 39.53
TraesCS4D01G271700.1 Wheat extracellular 60.61 39.53
Os03t0428700-01 Rice extracellular 61.21 39.45
HORVU5Hr1G119860.2 Barley extracellular 60.61 39.37
TraesCS5D01G527700.1 Wheat extracellular 60.61 39.22
EER94179 Sorghum extracellular 60.0 39.13
HORVU4Hr1G072660.1 Barley extracellular 60.0 39.13
TraesCS5D01G527800.1 Wheat extracellular 60.61 39.06
TraesCS1A01G406800.1 Wheat extracellular 60.61 39.06
TraesCS5B01G528700.1 Wheat extracellular 60.61 39.06
TraesCS1A01G406900.1 Wheat extracellular 60.0 38.98
TraesCS5B01G528500.1 Wheat extracellular 60.0 38.98
TraesCS4A01G345000.1 Wheat extracellular 60.0 38.98
Zm00001d032885_P001 Maize plastid 49.7 38.86
KXG38462 Sorghum extracellular 59.39 38.74
TraesCS4B01G272600.1 Wheat extracellular 59.39 38.74
Zm00001d035100_P001 Maize extracellular 60.0 38.67
TraesCS4B01G272700.1 Wheat extracellular 58.79 38.34
EER91570 Sorghum extracellular 58.18 38.25
Zm00001d035109_P001 Maize extracellular 58.79 38.19
Zm00001d035108_P001 Maize extracellular 58.79 38.19
Zm00001d035111_P001 Maize extracellular 58.79 38.19
TraesCS5B01G528400.1 Wheat extracellular 40.0 37.93
Zm00001d035102_P001 Maize extracellular 58.18 37.8
Os03t0156000-00 Rice extracellular 56.97 37.75
Zm00001d032882_P001 Maize extracellular 58.18 37.35
Os03t0155900-01 Rice extracellular 56.36 37.35
Zm00001d032884_P001 Maize extracellular 56.36 36.9
TraesCS4D01G270500.1 Wheat extracellular 56.36 36.61
HORVU4Hr1G072580.1 Barley extracellular 60.61 36.36
EES13271 Sorghum extracellular 56.97 36.29
Os03t0156300-00 Rice extracellular 52.73 36.25
TraesCS4B01G271300.1 Wheat extracellular 55.76 36.22
TraesCS4A01G034200.1 Wheat extracellular 55.15 35.83
HORVU4Hr1G072440.1 Barley extracellular 55.15 35.83
KXG29998 Sorghum extracellular 41.21 35.79
EES13270 Sorghum extracellular 55.76 35.38
HORVU5Hr1G119670.1 Barley extracellular 60.0 35.23
TraesCS4A01G345100.1 Wheat extracellular 47.88 35.11
HORVU5Hr1G119680.4 Barley extracellular 59.39 34.63
CDY04077 Canola extracellular 51.52 34.55
CDY44393 Canola extracellular 50.91 34.15
CDX85270 Canola extracellular 51.52 34.14
CDX86367 Canola extracellular 51.52 34.14
Zm00001d032883_P001 Maize extracellular 60.0 33.79
EER94181 Sorghum extracellular, plastid, vacuole 59.39 33.68
EES14433 Sorghum plastid 55.76 33.09
CDY16014 Canola extracellular 52.12 32.7
CDX85546 Canola extracellular 49.7 32.41
CDX90986 Canola extracellular 49.09 32.02
CDY58613 Canola extracellular 50.91 31.94
CDY57071 Canola extracellular 50.91 31.94
CDY21056 Canola extracellular 50.91 31.94
CDY15952 Canola extracellular 49.09 31.76
TraesCS5B01G528600.1 Wheat extracellular, plastid, vacuole 33.33 31.61
CDX98053 Canola extracellular 50.3 31.56
CDX75827 Canola extracellular 42.42 31.53
CDX97663 Canola extracellular 47.88 31.47
CDX98555 Canola extracellular 47.88 31.47
CDY64890 Canola extracellular 48.48 31.13
CDX82436 Canola extracellular 46.67 30.68
CDX99666 Canola extracellular 49.7 30.48
Zm00001d035112_P001 Maize extracellular 36.36 29.41
CDY37873 Canola extracellular 46.67 28.31
CDX74479 Canola extracellular 46.67 28.31
Protein Annotations
Gene3D:2.40.40.10MapMan:21.4.2.1GO:A0A078JEN8UniProt:A0A078JEN8EnsemblPlants:CDY66063ProteinID:CDY66063
ProteinID:CDY66063.1InterPro:Expan_Lol_pIInterPro:ExpansinInterPro:Expansin/allergen_DPBB_domGO:GO:0005575GO:GO:0005576
GO:GO:0008150GO:GO:0009664GO:GO:0009987GO:GO:0016043EnsemblPlantsGene:GSBRNA2T00051257001InterPro:IPR007112
InterPro:IPR036908PFAM:PF03330PRINTS:PR01225PRINTS:PR01226PFscan:PS50842PANTHER:PTHR31867
PANTHER:PTHR31867:SF4InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF50685UniParc:UPI0004EEDF30
Description
BnaCnng49490DBnaCnng49490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEN8]
Coordinates
chrLK035062:+:9022..10720
Molecular Weight (calculated)
17414.6 Da
IEP (calculated)
7.910
GRAVY (calculated)
-0.068
Length
165 amino acids
Sequence
(BLAST)
001: MAVDAFRPSG LTNGHATFYG ESDASGTMGG ACGYGDLYAG YGTMTAALST ALFNNGASCG ECYKITCDYA ADSRWCKKGA SVVITATNFC PPNFALPSNN
101: GGWCNPPLKH LDMAQPAWEK IGIYRGGIVP VVFQSCYKKG GVRFRINGRD YFELVNISNV GGAGC
Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)
001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
Arabidopsis Description
EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.