CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71009	Canola	extracellular	100.0	100.0
CDY66063	Canola	cytosol, extracellular, plastid	52.24	63.64
CDY44069	Canola	extracellular	43.28	55.77
CDY69805	Canola	extracellular	39.3	51.3
CDY44426	Canola	extracellular	25.87	42.98
CDY16014	Canola	extracellular	54.73	41.83
CDY58613	Canola	extracellular	53.73	41.06
CDY57071	Canola	extracellular	53.73	41.06
CDX98053	Canola	extracellular	53.73	41.06
CDY21056	Canola	extracellular	53.73	41.06
CDY64890	Canola	extracellular	51.74	40.47
CDX75827	Canola	extracellular	44.28	40.09
CDX82436	Canola	extracellular	49.75	39.84
CDX98555	Canola	extracellular	49.25	39.44
CDX97663	Canola	extracellular	49.25	39.44
CDY15952	Canola	extracellular	48.26	38.04
CDX90986	Canola	extracellular	46.77	37.15
CDX85546	Canola	extracellular	46.77	37.15
CDX85270	Canola	extracellular	45.77	36.95
CDX99666	Canola	extracellular	49.25	36.8
CDX86367	Canola	extracellular	44.78	36.14
CDY04077	Canola	extracellular	43.78	35.77
CDY44393	Canola	extracellular	43.78	35.77
CDY37873	Canola	extracellular	47.76	35.29
CDX74479	Canola	extracellular	47.76	35.29

Protein Annotations

Gene3D:2.40.40.10	MapMan:21.4.2.1	GO:A0A078K1H9	UniProt:A0A078K1H9	ProteinID:CDY71009.1	EnsemblPlants:CDY71742
ProteinID:CDY71742	ProteinID:CDY71742.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00019837001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330
PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PANTHER:PTHR31867	PANTHER:PTHR31867:SF34	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF50685	TMHMM:TMhelix	UniParc:UPI0004EE509F	:

Description

BnaCnng74230DBnaAnng35810D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K1H9]

Coordinates

chrLK047244:-:3..1221

Molecular Weight (calculated)

21756.3 Da

IEP (calculated)

9.841

GRAVY (calculated)

-0.006

Length

201 amino acids

Sequence
(BLAST)

001: MAKIASLLVA VIFYTMFFMK ISSVSAGWLR AHATFYGGSD ASGTMGGACG YGNLYTDGYK TNTAALSTAL FNDGKSCGGC YQIVCDASKV PQWCLRGRSI
101: TITATNFCPP NFAQASDNGG WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKRVGCRRSG GMRFTMNGRN YFELVLISNV GGAGEISKVW IKGSRSKKWE
201: T

Best Arabidopsis Sequence Match ( AT4G01630.1 )
(BLAST)

001: MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI
101: TITATNFCPP NFAQASDNGG WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV AGGGEISKVW IKGSKSNKWE
201: TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP SNWRFGQSFK SNVNF

Arabidopsis Description

EXPA17EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.