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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH56899 Soybean extracellular, mitochondrion, nucleus, plastid 50.64 82.29
CDY69805 Canola extracellular 51.28 51.95
CDY66063 Canola cytosol, extracellular, plastid 52.56 49.7
CDY44426 Canola extracellular 35.9 46.28
GSMUA_AchrUn_... Banana extracellular 63.46 43.61
CDY71742 Canola extracellular 55.77 43.28
CDY71009 Canola extracellular 55.77 43.28
CDX85546 Canola extracellular 52.56 32.41
CDX90986 Canola extracellular 52.56 32.41
CDY15952 Canola extracellular 51.92 31.76
CDX86367 Canola extracellular 50.64 31.73
CDX85270 Canola extracellular 50.64 31.73
CDY58613 Canola extracellular 53.21 31.56
CDY64890 Canola extracellular 51.92 31.52
CDX97663 Canola extracellular 50.64 31.47
CDX98555 Canola extracellular 50.64 31.47
CDY21056 Canola extracellular 52.56 31.18
CDY16014 Canola extracellular 51.92 30.8
CDX98053 Canola extracellular 51.92 30.8
CDX82436 Canola extracellular 49.36 30.68
CDY44393 Canola extracellular 48.08 30.49
CDY04077 Canola extracellular 48.08 30.49
CDX99666 Canola extracellular 52.56 30.48
CDY57071 Canola extracellular 51.28 30.42
CDX75827 Canola extracellular 42.31 29.73
CDY37873 Canola extracellular 50.0 28.68
CDX74479 Canola extracellular 50.0 28.68
HORVU1Hr1G069830.7 Barley cytosol, nucleus 45.51 23.67
Protein Annotations
Gene3D:2.40.40.10MapMan:21.4.2.1GO:A0A078I3C9UniProt:A0A078I3C9EnsemblPlants:CDY44069ProteinID:CDY44069
ProteinID:CDY44069.1InterPro:Expan_Lol_pIInterPro:ExpansinInterPro:Expansin/allergen_DPBB_domGO:GO:0005575GO:GO:0005576
GO:GO:0008150GO:GO:0009664GO:GO:0009987GO:GO:0016043EnsemblPlantsGene:GSBRNA2T00079491001InterPro:IPR007112
InterPro:IPR036908PFAM:PF03330PRINTS:PR01225PRINTS:PR01226PFscan:PS50842PANTHER:PTHR31867
PANTHER:PTHR31867:SF1InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF50685SignalP:SignalP-noTM
UniParc:UPI0004EF262ASEG:seg::::
Description
BnaA02g14330DBnaA02g14330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3C9]
Coordinates
chrLK032578:+:85056..86588
Molecular Weight (calculated)
16324.4 Da
IEP (calculated)
6.718
GRAVY (calculated)
0.049
Length
156 amino acids
Sequence
(BLAST)
001: MGLVSFLVMV VLAVMTSRVN GYGGGWVNAH ATFYGGGDAS GTMGGACGYG NLYSQGYGTN TAALSTALFN NGLSCGACFE IRCQDDGKWC LPGSIVVTAT
101: NFCPPNNALP NNAGGWCNPP QQHFDLSQPV FQRIAQHKAG IVPVAYRSKD ECMVGD
Best Arabidopsis Sequence Match ( AT1G69530.1 )
(BLAST)
001: MALVTFLFIA TLGAMTSHVN GYAGGGWVNA HATFYGGGDA SGTMGGACGY GNLYSQGYGT NTAALSTALF NNGLSCGACF EIRCQNDGKW CLPGSIVVTA
101: TNFCPPNNAL PNNAGGWCNP PQQHFDLSQP VFQRIAQYRA GIVPVAYRRV PCVRRGGIRF TINGHSYFNL VLITNVGGAG DVHSAMVKGS RTGWQAMSRN
201: WGQNWQSNSY LNGQSLSFKV TTSDGQTIVS NNVANAGWSF GQTFTGAQLR
Arabidopsis Description
ATEXPA1AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.