Factsheet for GSMUA_AchrUn_randomP24350_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56899	Soybean	extracellular, mitochondrion, nucleus, plastid	31.28	73.96
CDY44069	Canola	extracellular	43.61	63.46
GSMUA_Achr11P...	Banana	extracellular	40.53	36.8
GSMUA_Achr1P15400_001	Banana	extracellular	40.97	35.5
GSMUA_Achr10P...	Banana	extracellular	38.33	33.46
GSMUA_Achr1P00140_001	Banana	extracellular	34.36	32.1
GSMUA_Achr5P20270_001	Banana	extracellular	37.0	31.82
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	37.0	28.0
GSMUA_Achr4P27910_001	Banana	extracellular	28.63	26.42
GSMUA_Achr4P27950_001	Banana	extracellular	28.63	26.42
GSMUA_Achr4P28010_001	Banana	extracellular	28.63	26.42

Protein Annotations

Gene3D:2.40.40.10	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:GSMUA_AchrUn_randomG24350_001
EnsemblPlants:GSMUA_AchrUn_randomP24350_001	EnsemblPlants:GSMUA_AchrUn_randomT24350_001	InterPro:IPR007112	InterPro:IPR036908	UniProt:M0UBZ3	PFAM:PF03330
PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PANTHER:PTHR31867	PANTHER:PTHR31867:SF71	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000295D40C	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG24350_001]

Coordinates

chrchrUn_random:+:120980868..120982096

Molecular Weight (calculated)

24547.7 Da

IEP (calculated)

6.919

GRAVY (calculated)

-0.390

Length

227 amino acids

Sequence
(BLAST)

001: MASFPQLSLL LLFSSFALFF RGTSGDDSGW QSGHATFYGG GDASGTMGGA CGYGDLYSQG YGTNTAALST ALFGDGASCG ACYELRCADD PQWCLPGSIV
101: VTATNFCPPN YALPNDNGGW CNPPLQHFDM AEPAFLQIAQ YRAGIVPSGV REEGRDQVHD QWPFLLQPGA GDQRGRRRRR ARGIHQGFRH RVASDVAQLG
201: AELAEQCLPQ RSVSLLPGDH QRRPHRH

Best Arabidopsis Sequence Match ( AT1G69530.3 )
(BLAST)

001: MALVTFLFIA TLGAMTSHVN GYAGGGWVNA HATFYGGGDA SGTMGGACGY GNLYSQGYGT NTAALSTALF NNGLSCGACF EIRCQNDGKW CLPGSIVVTA
101: TNFCPPNNAL PNNAGGWCNP PQQHFDLSQP VFQRIAQYRA GIVPVAYRRV PCVRRGGIRF TINGHSYFNL VLITNVGGAG DVHSAMVKGS RTGWQAMSRN
201: WGQNWQSNSY LNGQSLSFKV TTSDGQTIVS NNVANAGWSF GQTFTVEAVR ERGMIVIWSF LSIEVNLKRS GASSA

Arabidopsis Description

ATEXPA1AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.