Factsheet for HORVU1Hr1G069830.7

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56899	Soybean	extracellular, mitochondrion, nucleus, plastid	18.67	58.33
CDY44069	Canola	extracellular	23.67	45.51
GSMUA_AchrUn_...	Banana	extracellular	28.0	37.0
HORVU5Hr1G121370.1	Barley	extracellular	29.67	34.9
HORVU3Hr1G076620.1	Barley	extracellular	28.67	34.54
HORVU3Hr1G076670.1	Barley	extracellular	28.67	34.54
HORVU3Hr1G076640.2	Barley	extracellular	28.67	34.54
HORVU5Hr1G119860.2	Barley	extracellular	28.67	33.86
HORVU4Hr1G072660.1	Barley	extracellular	27.67	32.81
HORVU4Hr1G072440.1	Barley	extracellular	27.33	32.28
HORVU0Hr1G032890.2	Barley	extracellular	21.67	31.86
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	30.0	31.58
HORVU1Hr1G036910.1	Barley	extracellular	12.67	30.89
HORVU5Hr1G119670.1	Barley	extracellular	28.67	30.61
HORVU4Hr1G072580.1	Barley	extracellular	27.67	30.18
HORVU5Hr1G119680.4	Barley	extracellular	28.33	30.04
HORVU7Hr1G075680.1	Barley	extracellular	24.33	28.29
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	13.67	28.08
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	13.67	27.52
HORVU3Hr1G076630.1	Barley	extracellular	19.33	26.01
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	24.67	22.22
HORVU1Hr1G051590.1	Barley	plastid	11.0	11.0

Protein Annotations

Gene3D:2.40.40.10	MapMan:21.4.2.1	UniProt:A0A287G3S2	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	GO:GO:0008150
GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:HORVU1Hr1G069830	EnsemblPlants:HORVU1Hr1G069830.7	InterPro:IPR007112
InterPro:IPR036908	PFAM:PF03330	PRINTS:PR01226	PFscan:PS50842	PANTHER:PTHR31867	PANTHER:PTHR31867:SF72
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF50685	UniParc:UPI000B472D1A	SEG:seg

Description

No Description!

Coordinates

chrchr1H:+:487104543..487105897

Molecular Weight (calculated)

33384.7 Da

IEP (calculated)

11.249

GRAVY (calculated)

-0.581

Length

300 amino acids

Sequence
(BLAST)

001: GYGNLYSTGY GTNTAALSTA LFNDGAACGS CYELRCDNAG SSCRPGSIMV TATNFCPPNY GLPSDDGGWC NPPRPHFDMA EPAFLHIAQY RAGIVPVSYR
101: RGAVREEGGH PVHHQRPLLL QPGAGDQRGR RRRRALRVHQ GHAHRLAGHV PQLGHELAEQ HLPGRPVPLL QGHLQRRPHR HQQRRRARRL AVRPDLRGRP
201: VLVHSISISI FFFSTGISTG EKRRTGHICT FEELFWHSRA CSAGGGRNKS RPLRYSEGGR LRATLRLLIS TRLDVFLLSS HQSLEFIEDS NNHPSTTVRT

Best Arabidopsis Sequence Match ( AT1G69530.1 )
(BLAST)

001: MALVTFLFIA TLGAMTSHVN GYAGGGWVNA HATFYGGGDA SGTMGGACGY GNLYSQGYGT NTAALSTALF NNGLSCGACF EIRCQNDGKW CLPGSIVVTA
101: TNFCPPNNAL PNNAGGWCNP PQQHFDLSQP VFQRIAQYRA GIVPVAYRRV PCVRRGGIRF TINGHSYFNL VLITNVGGAG DVHSAMVKGS RTGWQAMSRN
201: WGQNWQSNSY LNGQSLSFKV TTSDGQTIVS NNVANAGWSF GQTFTGAQLR

Arabidopsis Description

ATEXPA1AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.