Factsheet for HORVU3Hr1G034030.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:

nucleus 1
golgi 2
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G199900.1	Wheat	extracellular	85.26	96.81
TraesCS3A01G165900.1	Wheat	extracellular	83.86	96.76
TraesCS3D01G175800.1	Wheat	extracellular	84.91	96.41
Os01t0248900-01	Rice	extracellular	71.58	81.27
HORVU3Hr1G076670.1	Barley	extracellular	65.96	75.5
HORVU3Hr1G076620.1	Barley	extracellular	65.96	75.5
HORVU3Hr1G076640.2	Barley	extracellular	65.96	75.5
GSMUA_Achr11P...	Banana	extracellular	61.4	70.0
HORVU5Hr1G121370.1	Barley	extracellular	60.0	67.06
Zm00001d040247_P001	Maize	extracellular	65.96	65.73
HORVU3Hr1G076630.1	Barley	extracellular	50.88	65.02
HORVU5Hr1G119860.2	Barley	extracellular	52.63	59.06
HORVU4Hr1G072660.1	Barley	extracellular	51.58	58.1
HORVU4Hr1G072440.1	Barley	extracellular	50.18	56.3
HORVU4Hr1G072580.1	Barley	extracellular	52.28	54.18
HORVU5Hr1G119670.1	Barley	extracellular	52.98	53.74
HORVU5Hr1G119680.4	Barley	extracellular	52.98	53.36
HORVU0Hr1G032890.2	Barley	extracellular	37.89	52.94
HORVU1Hr1G036910.1	Barley	extracellular	21.4	49.59
Solyc07g063210.2.1	Tomato	extracellular	44.21	49.22
VIT_19s0014g02910.t01	Wine grape	extracellular	41.75	46.3
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	22.11	43.15
HORVU7Hr1G075680.1	Barley	extracellular	38.6	42.64
AT3G15370.2	Thale cress	extracellular	42.11	42.55
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	21.05	40.27
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	37.89	32.43
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	31.58	30.0
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	42.81	27.42
HORVU1Hr1G051590.1	Barley	plastid	19.3	18.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312
EnsemblPlantsGene:HORVU3Hr1G034030	EnsemblPlants:HORVU3Hr1G034030.1	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
UniProt:M0ZD78	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF36	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	TMHMM:TMhelix	UniParc:UPI0002966D70	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:-:182911321..182912721

Molecular Weight (calculated)

30501.2 Da

IEP (calculated)

9.117

GRAVY (calculated)

-0.109

Length

285 amino acids

Sequence
(BLAST)

001: MLLQNTRRTV KQDTFRAEYD LALVPSCSAG SNAVMAVIKM LVLPALCALL LRAASAAQWT PAHATFYGGG DASGTMGGAC GYGNLYGAGY GTQTTALSTA
101: LFNNGASCGA CFTIACDTRK SRMCKPGTSI TVTATNFCPP NYALASDNGG WCNPPRQHFD MAQPAWETIA VYKAGIVPVN YRRVRCQRSG GIRFTINGHS
201: YFELVLVTNV GGSGGVAQMW IKGSRTNWME MSRNWGANWQ SNANLDGQSL SFRLKSDDGR LVTANNVAPS GWWFGGTYTS GAQLY

Best Arabidopsis Sequence Match ( AT1G69530.1 )
(BLAST)

001: MALVTFLFIA TLGAMTSHVN GYAGGGWVNA HATFYGGGDA SGTMGGACGY GNLYSQGYGT NTAALSTALF NNGLSCGACF EIRCQNDGKW CLPGSIVVTA
101: TNFCPPNNAL PNNAGGWCNP PQQHFDLSQP VFQRIAQYRA GIVPVAYRRV PCVRRGGIRF TINGHSYFNL VLITNVGGAG DVHSAMVKGS RTGWQAMSRN
201: WGQNWQSNSY LNGQSLSFKV TTSDGQTIVS NNVANAGWSF GQTFTGAQLR

Arabidopsis Description

ATEXPA1AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.