Factsheet for GSMUA_Achr11P22960_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G199900.1	Wheat	extracellular	71.2	70.92
TraesCS3A01G165900.1	Wheat	extracellular	70.0	70.85
TraesCS3D01G175800.1	Wheat	extracellular	70.8	70.52
TraesCS3A01G317900.1	Wheat	extracellular	70.0	70.28
HORVU3Hr1G076670.1	Barley	extracellular	70.0	70.28
TraesCS3D01G313300.1	Wheat	extracellular	68.4	70.08
TraesCS3D01G313400.1	Wheat	extracellular	69.6	69.88
TraesCS3A01G318000.1	Wheat	extracellular	69.6	69.88
TraesCS3B01G347900.1	Wheat	extracellular	69.6	69.88
HORVU3Hr1G076620.1	Barley	extracellular	69.6	69.88
TraesCS3A01G318100.1	Wheat	extracellular	69.2	69.48
TraesCS3D01G313200.1	Wheat	extracellular	69.2	69.48
TraesCS3D01G313100.1	Wheat	extracellular	69.2	69.48
TraesCS3B01G348000.1	Wheat	extracellular	69.2	69.48
Os01t0248900-01	Rice	extracellular	69.6	69.32
HORVU3Hr1G076640.2	Barley	extracellular	68.8	69.08
TraesCS5B01G548500.1	Wheat	extracellular	67.6	66.27
TraesCS5D01G535500.1	Wheat	extracellular	66.8	65.49
TraesCS4A01G339200.1	Wheat	extracellular	66.8	65.49
TraesCS3B01G200100.1	Wheat	extracellular	66.4	65.1
TraesCS3D01G176000.1	Wheat	extracellular	66.4	65.1
TraesCS3A01G165600.1	Wheat	extracellular	66.0	64.71
Os05t0276500-01	Rice	extracellular	65.6	64.31
HORVU5Hr1G121370.1	Barley	extracellular	65.2	63.92
Os01t0249100-00	Rice	extracellular	55.6	63.76
Os05t0277000-00	Rice	extracellular	63.2	63.71
Zm00001d040249_P001	Maize	extracellular	62.8	62.3
EES02419	Sorghum	extracellular	62.8	62.06
HORVU3Hr1G076630.1	Barley	extracellular	54.8	61.44
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	70.0	61.4
EES02683	Sorghum	extracellular	62.0	61.02
Zm00001d040247_P001	Maize	extracellular	68.4	59.79
GSMUA_Achr1P00140_001	Banana	extracellular	50.8	52.26
GSMUA_Achr5P20270_001	Banana	extracellular	52.8	50.0
GSMUA_Achr10P...	Banana	extracellular	49.6	47.69
HORVU0Hr1G032890.2	Barley	extracellular	38.4	47.06
GSMUA_Achr1P15400_001	Banana	extracellular	48.8	46.56
GSMUA_Achr4P27950_001	Banana	extracellular	43.2	43.9
GSMUA_Achr4P28010_001	Banana	extracellular	42.8	43.5
GSMUA_Achr4P27910_001	Banana	extracellular	42.0	42.68
GSMUA_AchrUn_...	Banana	extracellular	36.8	40.53

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312
EnsemblPlantsGene:GSMUA_Achr11G22960_001	EnsemblPlants:GSMUA_Achr11P22960_001	EnsemblPlants:GSMUA_Achr11T22960_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	UniProt:M0RUM6	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF32	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0002948BD4	SEG:seg

Description

Expansin-A8 [Source:GMGC_GENE;Acc:GSMUA_Achr11G22960_001]

Coordinates

chr11:-:23054950..23056041

Molecular Weight (calculated)

27329.2 Da

IEP (calculated)

8.694

GRAVY (calculated)

-0.191

Length

250 amino acids

Sequence
(BLAST)

001: MEKAALLLLF LAWFASEFRA LGDDWIPASA TFYGGGDASG TMGGACGYQN LYTDGYGIKN TALSTALFNN GAACGACFQI VCDSRKSTWC KKGTHITVTA
101: TNYCPPNYDL PSDNGGWCNP PRQHFDMSQP AWETIAVYRG GIVPVYYRRV KCQRSGGIRF TINGKNYFEL VLIANVGGSG VVSGAWIKGS DTQWMAMSRN
201: WGMNWQSNAY LTGQSLSFRV QTSDGKVKTA YDVAPATWKF GDTYASSIRF

Best Arabidopsis Sequence Match ( AT4G01630.1 )
(BLAST)

001: MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI
101: TITATNFCPP NFAQASDNGG WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV AGGGEISKVW IKGSKSNKWE
201: TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP SNWRFGQSFK SNVNF

Arabidopsis Description

EXPA17EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.