Factsheet for Os01t0248900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G165900.1	Wheat	extracellular	82.47	83.81
TraesCS3D01G175800.1	Wheat	extracellular	83.27	83.27
TraesCS3B01G199900.1	Wheat	extracellular	82.87	82.87
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	81.27	71.58
Os01t0249100-00	Rice	extracellular	62.15	71.56
Os05t0276500-01	Rice	extracellular	72.51	71.37
GSMUA_Achr11P...	Banana	extracellular	69.32	69.6
Os05t0277000-00	Rice	extracellular	68.53	69.35
Zm00001d040247_P001	Maize	extracellular	78.09	68.53
Os10t0439100-00	Rice	extracellular	64.94	63.92
Os03t0428700-01	Rice	extracellular	62.55	61.33
Os06t0718100-01	Rice	plastid	63.35	60.46
Os03t0155900-01	Rice	extracellular	57.37	57.83
Os03t0156000-00	Rice	extracellular	56.97	57.43
Os03t0156300-00	Rice	extracellular	53.78	56.25
Os10t0535900-00	Rice	extracellular	55.38	52.26
Solyc07g063210.2.1	Tomato	extracellular	47.01	46.09
VIT_19s0014g02910.t01	Wine grape	extracellular	45.82	44.75
AT3G15370.2	Thale cress	extracellular	47.01	41.84
Os06t0108600-00	Rice	extracellular	39.84	37.31
Os12t0546800-01	Rice	plasma membrane	40.24	34.83
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	47.01	26.52

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EntrezGene:4327217	ProteinID:AAD38296.1	EMBL:AK111100
ProteinID:BAB18336.1	ProteinID:BAF04501.1	ProteinID:BAS71334.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312
GO:GO:0071555	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EnsemblPlantsGene:Os01g0248900
EnsemblPlants:Os01t0248900-01	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF36	UniProt:Q9XHX0	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000AA287
RefSeq:XP_015632452.1	SEG:seg	:	:	:	:

Description

ALPHA-EXPANSIN 8Alpha-expansin, Mediation of the cell extension and growth, Root system architecture (Os01t0248900-01)

Coordinates

chr1:-:8196083..8197096

Molecular Weight (calculated)

26335.1 Da

IEP (calculated)

8.781

GRAVY (calculated)

0.073

Length

251 amino acids

Sequence
(BLAST)

001: MAAARMLVLL ASLCALLLTA SAAKWTPAFA TFYGGSDASG TMGGACGYGD LYGAGYGTRT AALSTALFNG GASCGACFTI ACDTRKTQWC KPGTSITVTA
101: TNFCPPNYAL SGDAGGWCNP PRRHFDMSQP AWETIAVYRA GIVPVNYRRV PCQRSGGIRF AVNGHSYFEL VLVTNVGGSG AVAQMWIKGS GTGWMAMSRN
201: WGANWQSNAR LDGQALSFRV QADDGRVVTA ADVAPAGWSF GATYTSSAQF Y

Best Arabidopsis Sequence Match ( AT4G01630.1 )
(BLAST)

001: MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI
101: TITATNFCPP NFAQASDNGG WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV AGGGEISKVW IKGSKSNKWE
201: TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP SNWRFGQSFK SNVNF

Arabidopsis Description

EXPA17EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.