Factsheet for Os10t0535900-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047353_P001	Maize	extracellular	79.7	82.17
EER94586	Sorghum	extracellular	78.57	79.17
TraesCS1A01G199400.1	Wheat	extracellular	74.06	76.06
TraesCS1D01G203100.1	Wheat	extracellular	74.06	76.06
TraesCS1B01G214200.1	Wheat	extracellular	73.31	74.71
TraesCS1B01G214300.1	Wheat	extracellular	73.31	74.71
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	74.44	70.46
GSMUA_Achr10P...	Banana	extracellular	65.41	66.92
PGSC0003DMT400058522	Potato	plastid	61.28	66.53
PGSC0003DMT400032527	Potato	extracellular	51.5	65.87
KRH04002	Soybean	extracellular	63.91	64.15
GSMUA_Achr5P20270_001	Banana	extracellular	63.53	64.02
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	57.52	63.75
KRH77459	Soybean	extracellular	61.65	63.08
VIT_02s0025g04700.t01	Wine grape	extracellular	62.03	62.5
KRH27987	Soybean	extracellular	60.53	61.92
Bra026965.1-P	Field mustard	extracellular	60.53	61.22
CDY16014	Canola	extracellular	60.53	61.22
Solyc08g080060.2.1	Tomato	extracellular	61.65	60.97
CDY57071	Canola	extracellular	59.4	60.08
AT1G12560.1	Thale cress	extracellular	59.02	59.92
CDY21056	Canola	extracellular	59.02	59.7
CDX98053	Canola	extracellular	59.02	59.7
CDY58613	Canola	extracellular	59.02	59.7
Bra019775.1-P	Field mustard	extracellular	59.02	59.7
Bra016767.1-P	Field mustard	extracellular	59.02	59.7
CDY64890	Canola	extracellular	57.52	59.53
CDY69805	Canola	extracellular	33.83	58.44
AT1G62980.1	Thale cress	extracellular	54.89	56.81
KRH57276	Soybean	extracellular	48.5	56.33
Os01t0248900-01	Rice	extracellular	52.26	55.38
Os10t0439100-00	Rice	extracellular	51.5	53.73
Os03t0428700-01	Rice	extracellular	49.62	51.56
Os01t0249100-00	Rice	extracellular	42.11	51.38
Os06t0718100-01	Rice	plastid	50.38	50.95
Solyc08g007780.2.1	Tomato	extracellular	24.06	50.39
Os05t0276500-01	Rice	extracellular	47.37	49.41
Os03t0156000-00	Rice	extracellular	45.86	49.0
Os03t0155900-01	Rice	extracellular	45.86	49.0
Os03t0156300-00	Rice	extracellular	43.98	48.75
Os05t0277000-00	Rice	extracellular	45.11	48.39
Os06t0108600-00	Rice	extracellular	46.24	45.9
Os12t0546800-01	Rice	plasma membrane	36.84	33.79
HORVU1Hr1G051590.1	Barley	plastid	25.19	22.33

Protein Annotations

EntrezGene:107277540	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	ProteinID:AAL58125.1	ProteinID:AAP54808.1
ProteinID:BAT11819.1	ProteinID:EAZ16807.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	GO:GO:0071555
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EnsemblPlantsGene:Os10g0535900	EnsemblPlants:Os10t0535900-00
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF2	UniProt:Q8W2X8	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000A5B25	RefSeq:XP_015614556.1
SEG:seg	:	:	:	:	:

Description

EXPA30Similar to ATEXPA7 (ARABIDOPSIS THALIANA EXPANSIN A7). (Os10t0535900-00)

Coordinates

chr10:+:20846252..20847616

Molecular Weight (calculated)

27932.1 Da

IEP (calculated)

8.461

GRAVY (calculated)

0.058

Length

266 amino acids

Sequence
(BLAST)

001: MAAASSTTAT TAILAAVIIS LAGAATTVDA KFRAMQWTPA HATFYGDETA SETMGGACGY GNLYASGYGT DTAALSTTLF KDGYGCGTCY QMRCVGTASC
101: YRGSPAITVT ATNLCPPNWA EDPDRGGGGW CNPPRAHFDL SKPAFMRMAD WRAGIVPVMY RRVPCARAGG LRFALQGNPY WLLAYVMNVA GAGDVGDMWV
201: KAGGGGGWVR MSHNWGASYQ AFAQLGGQAL SFKVTSYTTG QTILAAGVTP ASWCFGLTYQ ARVNFS

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.