CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016767.1-P	Field mustard	extracellular	99.62	99.62
CDY21056	Canola	extracellular	99.62	99.62
CDX98053	Canola	extracellular	94.68	94.68
CDY57071	Canola	extracellular	94.3	94.3
CDY16014	Canola	extracellular	93.16	93.16
AT1G12560.1	Thale cress	extracellular	90.11	90.46
CDY64890	Canola	extracellular	71.48	73.15
PGSC0003DMT400058522	Potato	plastid	64.26	68.98
CDY69805	Canola	extracellular	40.3	68.83
PGSC0003DMT400032527	Potato	extracellular	53.99	68.27
KRH77459	Soybean	extracellular	66.16	66.92
KRH27987	Soybean	extracellular	65.78	66.54
KRH04002	Soybean	extracellular	65.02	64.53
VIT_02s0025g04700.t01	Wine grape	extracellular	64.64	64.39
GSMUA_Achr10P...	Banana	extracellular	63.5	64.23
Solyc08g080060.2.1	Tomato	extracellular	64.64	63.2
GSMUA_Achr5P20270_001	Banana	extracellular	62.74	62.5
Zm00001d047353_P001	Maize	extracellular	60.46	61.63
EER94586	Sorghum	extracellular	60.84	60.61
TraesCS1D01G203100.1	Wheat	extracellular	59.32	60.23
TraesCS1B01G214300.1	Wheat	extracellular	59.32	59.77
TraesCS1B01G214200.1	Wheat	extracellular	59.32	59.77
TraesCS1A01G199400.1	Wheat	extracellular	58.56	59.46
Os10t0535900-00	Rice	extracellular	59.7	59.02
KRH57276	Soybean	extracellular	47.91	55.02
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	58.56	54.8
CDY71742	Canola	extracellular	41.06	53.73
CDY71009	Canola	extracellular	41.06	53.73
CDY44069	Canola	extracellular	31.56	53.21
CDY66063	Canola	cytosol, extracellular, plastid	31.94	50.91
CDX85546	Canola	extracellular	45.25	47.04
Solyc08g007780.2.1	Tomato	extracellular	22.43	46.46
CDX75827	Canola	extracellular	38.78	45.95
CDX90986	Canola	extracellular	44.11	45.85
CDY44393	Canola	extracellular	42.21	45.12
CDY04077	Canola	extracellular	42.21	45.12
CDX86367	Canola	extracellular	42.59	44.98
CDX85270	Canola	extracellular	42.59	44.98
CDX82436	Canola	extracellular	42.21	44.22
CDX97663	Canola	extracellular	41.44	43.43
CDX98555	Canola	extracellular	41.44	43.43
CDY37873	Canola	extracellular	44.87	43.38
CDX74479	Canola	extracellular	44.87	43.38
CDY15952	Canola	extracellular	41.06	42.35
CDX99666	Canola	extracellular	41.83	40.89
CDY44426	Canola	extracellular	17.11	37.19
HORVU1Hr1G051590.1	Barley	plastid	19.77	17.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	GO:A0A078J641	UniProt:A0A078J641	EnsemblPlants:CDY58613
ProteinID:CDY58613	ProteinID:CDY58613.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030312
EnsemblPlantsGene:GSBRNA2T00024895001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357
PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867
PANTHER:PTHR31867:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
TMHMM:TMhelix	UniParc:UPI0004EEE706	SEG:seg	:	:	:

Description

BnaCnng33410DBnaCnng33410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J641]

Coordinates

chrLK033683:-:26817..27852

Molecular Weight (calculated)

28954.3 Da

IEP (calculated)

9.484

GRAVY (calculated)

-0.126

Length

263 amino acids

Sequence
(BLAST)

001: MGPVSSSWSF NKFFAIVFVV FAISGEFVAG YYKPSPWRYA HATFYGDETG SETMGGACGY GNLFSSGYGL ATAALSTTLF KDGYGCGQCF QIMCVKSKHC
101: YYGNPSTVVT ATNLCPPNWY QDSNNGGWCN PPRTHFDMAK PAFMKLANWK AGIIPVAYRR VACKRSGGMR FQFQGNAYWL LIFVMNVGGA GDIKSMAVKG
201: SRTNWISMSH NWGASYQAFS SLYGQSLSFR VTSYTTGETV YAWNVAPSNW NAGMTYKSSA NFR

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.