CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028232.1-P	Field mustard	extracellular	99.63	99.63
CDY37873	Canola	extracellular	98.9	98.9
AT5G39270.1	Thale cress	extracellular	77.57	75.63
AT5G39290.1	Thale cress	extracellular	76.47	74.55
AT5G39280.1	Thale cress	extracellular	72.43	71.64
AT5G39300.1	Thale cress	extracellular	72.43	71.38
CDY15952	Canola	extracellular	62.87	67.06
AT5G39260.1	Thale cress	extracellular	62.87	65.27
CDX99666	Canola	extracellular	64.34	65.06
CDX85546	Canola	extracellular	53.68	57.71
Solyc03g115350.1.1	Tomato	extracellular	53.68	56.59
KRH01265	Soybean	extracellular	47.43	56.58
CDY04077	Canola	extracellular	51.1	56.5
CDY44393	Canola	extracellular	51.1	56.5
VIT_07s0005g04850.t01	Wine grape	extracellular	49.63	56.25
CDX90986	Canola	extracellular	52.21	56.13
Solyc03g115310.1.1	Tomato	extracellular	53.31	55.98
CDX86367	Canola	extracellular	51.1	55.82
KRH44992	Soybean	extracellular	52.94	55.6
Solyc03g115270.1.1	Tomato	extracellular	52.94	55.6
CDX85270	Canola	extracellular	50.37	55.02
Solyc03g115320.1.1	Tomato	extracellular	52.57	55.0
Solyc03g115300.1.1	Tomato	extracellular	51.84	54.44
Solyc03g115340.1.1	Tomato	mitochondrion	33.09	50.85
CDY44069	Canola	extracellular	28.68	50.0
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	45.22	49.6
HORVU7Hr1G075680.1	Barley	extracellular	45.96	48.45
CDY71009	Canola	extracellular	35.29	47.76
CDY71742	Canola	extracellular	35.29	47.76
TraesCS7D01G314100.1	Wheat	extracellular	45.22	47.67
CDY66063	Canola	cytosol, extracellular, plastid	28.31	46.67
CDX98053	Canola	extracellular	44.12	45.63
EES14420	Sorghum	extracellular	44.12	45.11
CDY58613	Canola	extracellular	43.38	44.87
CDY21056	Canola	extracellular	43.38	44.87
CDY57071	Canola	extracellular	43.38	44.87
CDY16014	Canola	extracellular	43.01	44.49
GSMUA_Achr4P27950_001	Banana	extracellular	40.07	44.31
CDX75827	Canola	extracellular	36.03	44.14
GSMUA_Achr4P28010_001	Banana	extracellular	39.71	43.9
Zm00001d035083_P001	Maize	extracellular	44.49	43.68
CDY69805	Canola	extracellular	24.63	43.51
GSMUA_Achr4P27910_001	Banana	extracellular	39.34	43.5
CDX97663	Canola	extracellular	39.34	42.63
CDY64890	Canola	extracellular	40.07	42.41
CDX98555	Canola	extracellular	38.97	42.23
CDX82436	Canola	extracellular	38.6	41.83
Os12t0546800-01	Rice	plasma membrane	36.76	34.48
CDY44426	Canola	extracellular	15.07	33.88
PGSC0003DMT400063359	Potato	cytosol, plastid, vacuole	48.53	32.2
PGSC0003DMT400063363	Potato	extracellular	52.94	29.51

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	GO:A0A078CE94	EnsemblPlants:CDX74479	ProteinID:CDX74479
ProteinID:CDX74479.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00114362001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357
PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867
PANTHER:PTHR31867:SF70	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
UniParc:UPI0004EEAF6C	:	:	:	:	:

Description

BnaA04g09100D

Coordinates

chrLK031801:+:615798..617240

Molecular Weight (calculated)

30326.6 Da

IEP (calculated)

8.531

GRAVY (calculated)

-0.179

Length

272 amino acids

Sequence
(BLAST)

001: MKLNFEKMMY VKVLMMVIAI WFVPMTYSNE AQAPAGDVAE APGTDRFNND WYDARATFYG DIHGGDTQMG ACGYGDLFKQ GYGLATAALS PALFNDGYTC
101: GACYEIMCTR DPQWCLPGSI KITATNLCPA NYTKTTDIWC NPPQKHFDLS MPMFLKIAKY KAGVVPVRYR RVPCTKNGGV KFETSGNPYF LMILPYNVGG
201: AGDINAMQIK GSTTGWINMR KNWGQHWTTN IVLTGQGLSF MVRTSDGVVK QFMNVAPNNW GFQQTFDGRI NF

Best Arabidopsis Sequence Match ( AT5G39270.1 )
(BLAST)

001: MKLLEKMIYV EFLMIIMVIW VVPMSYGHGA MIGNAVEAPD VAEAPGINDP SKALDTNWYD ARATFYGDIH GGDTQQGACG YGNLFRQGYG LATAALSTAL
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKGNK TGWITMKKNW GQNWTTITVL TGQGLSFRVT TSDGITKDFW NVMPKNWGFG QTFDGRINF

Arabidopsis Description

EXPA22Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.