Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G39270.1 | Thale cress | extracellular | 97.49 | 97.49 |
| AT5G39280.1 | Thale cress | extracellular | 78.85 | 80.0 |
| AT5G39300.1 | Thale cress | extracellular | 78.49 | 79.35 |
| Bra028232.1-P | Field mustard | extracellular | 74.91 | 76.84 |
| CDY37873 | Canola | extracellular | 74.91 | 76.84 |
| CDX74479 | Canola | extracellular | 74.55 | 76.47 |
| AT5G39260.1 | Thale cress | extracellular | 64.87 | 69.08 |
| VIT_07s0005g04850.t01 | Wine grape | extracellular | 49.1 | 57.08 |
| KRH01265 | Soybean | extracellular | 46.24 | 56.58 |
| Solyc03g115270.1.1 | Tomato | extracellular | 52.33 | 56.37 |
| Solyc03g115310.1.1 | Tomato | extracellular | 51.97 | 55.98 |
| KRH44992 | Soybean | extracellular | 51.97 | 55.98 |
| Solyc03g115350.1.1 | Tomato | extracellular | 51.25 | 55.43 |
| AT5G39310.1 | Thale cress | extracellular | 59.5 | 53.21 |
| Solyc03g115320.1.1 | Tomato | extracellular | 49.46 | 53.08 |
| Solyc03g115300.1.1 | Tomato | extracellular | 48.03 | 51.74 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 45.52 | 51.21 |
| HORVU7Hr1G075680.1 | Barley | extracellular | 46.59 | 50.39 |
| TraesCS7D01G314100.1 | Wheat | extracellular | 46.24 | 50.0 |
| Solyc03g115340.1.1 | Tomato | mitochondrion | 31.54 | 49.72 |
| GSMUA_Achr4P27950_001 | Banana | extracellular | 41.22 | 46.75 |
| AT1G12560.1 | Thale cress | extracellular | 43.73 | 46.56 |
| GSMUA_Achr4P28010_001 | Banana | extracellular | 40.86 | 46.34 |
| GSMUA_Achr4P27910_001 | Banana | extracellular | 40.5 | 45.94 |
| AT1G62980.1 | Thale cress | extracellular | 41.94 | 45.53 |
| EES14420 | Sorghum | extracellular | 43.37 | 45.49 |
| Zm00001d035083_P001 | Maize | extracellular | 44.09 | 44.4 |
| AT3G15370.2 | Thale cress | extracellular | 39.78 | 39.36 |
| Os12t0546800-01 | Rice | plasma membrane | 35.84 | 34.48 |
| PGSC0003DMT400063359 | Potato | cytosol, plastid, vacuole | 47.31 | 32.2 |
| PGSC0003DMT400063363 | Potato | extracellular | 51.25 | 29.3 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | EntrezGene:833925 | ProteinID:AED94416.2 | ArrayExpress:AT5G39290 |
| EnsemblPlantsGene:AT5G39290 | RefSeq:AT5G39290 | TAIR:AT5G39290 | RefSeq:AT5G39290-TAIR-G | EnsemblPlants:AT5G39290.1 | TAIR:AT5G39290.1 |
| Symbol:ATEXP26 | ProteinID:BAB09384.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 | GO:GO:0071555 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | RefSeq:NP_198745.2 | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 |
| PANTHER:PTHR31867:SF70 | UniProt:Q9FL78 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 |
| SUPFAM:SSF50685 | TMHMM:TMhelix | UniParc:UPI000012A2C1 | : | : | : |
Description
EXPA26Putative expansin-A26 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL78]
Coordinates
chr5:-:15735794..15736979
Molecular Weight (calculated)
30981.4 Da
IEP (calculated)
8.679
GRAVY (calculated)
-0.146
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLEKMIYV EFLMIIMAMW VVPMSYGHGA MIGNAVEAPD VAEAPGINDP SKALDPNWYD ARATFYGDIH GGDTQQGACG YGNLFRQGYG LATAALSTAL
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKENK TGWITMKKNW GQNWTTSTVL TGQGLSFRVT TTDGITKDFW NVMPKNWGFG QTFDGKINF
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKENK TGWITMKKNW GQNWTTSTVL TGQGLSFRVT TTDGITKDFW NVMPKNWGFG QTFDGKINF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.