Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030353.1-P | Field mustard | extracellular | 61.22 | 74.9 |
| CDY15952 | Canola | extracellular | 61.22 | 74.9 |
| CDX99666 | Canola | extracellular | 61.22 | 71.0 |
| AT5G39300.1 | Thale cress | extracellular | 55.77 | 63.04 |
| AT5G39280.1 | Thale cress | extracellular | 55.45 | 62.91 |
| VIT_07s0005g04850.t01 | Wine grape | extracellular | 47.12 | 61.25 |
| AT5G39270.1 | Thale cress | extracellular | 53.53 | 59.86 |
| AT5G39290.1 | Thale cress | extracellular | 53.21 | 59.5 |
| KRH44992 | Soybean | extracellular | 47.76 | 57.53 |
| KRH01265 | Soybean | extracellular | 41.99 | 57.46 |
| Solyc03g115350.1.1 | Tomato | extracellular | 47.12 | 56.98 |
| Solyc03g115310.1.1 | Tomato | extracellular | 47.12 | 56.76 |
| AT5G39260.1 | Thale cress | extracellular | 47.44 | 56.49 |
| Solyc03g115270.1.1 | Tomato | extracellular | 46.79 | 56.37 |
| Solyc03g115320.1.1 | Tomato | extracellular | 46.15 | 55.38 |
| Solyc03g115300.1.1 | Tomato | extracellular | 45.51 | 54.83 |
| Solyc03g115340.1.1 | Tomato | mitochondrion | 30.13 | 53.11 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 38.46 | 48.39 |
| HORVU7Hr1G075680.1 | Barley | extracellular | 39.42 | 47.67 |
| TraesCS7D01G314100.1 | Wheat | extracellular | 39.1 | 47.29 |
| EES14420 | Sorghum | extracellular | 37.5 | 43.98 |
| GSMUA_Achr4P27950_001 | Banana | extracellular | 34.29 | 43.5 |
| Zm00001d035083_P001 | Maize | extracellular | 38.46 | 43.32 |
| GSMUA_Achr4P28010_001 | Banana | extracellular | 33.97 | 43.09 |
| GSMUA_Achr4P27910_001 | Banana | extracellular | 33.65 | 42.68 |
| AT1G12560.1 | Thale cress | extracellular | 34.29 | 40.84 |
| AT1G62980.1 | Thale cress | extracellular | 33.33 | 40.47 |
| Os12t0546800-01 | Rice | plasma membrane | 33.33 | 35.86 |
| AT3G15370.2 | Thale cress | extracellular | 30.45 | 33.69 |
| PGSC0003DMT400063359 | Potato | cytosol, plastid, vacuole | 43.59 | 33.17 |
| PGSC0003DMT400063363 | Potato | extracellular | 49.04 | 31.35 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | EntrezGene:833927 | ProteinID:AED94418.2 | ArrayExpress:AT5G39310 |
| EnsemblPlantsGene:AT5G39310 | RefSeq:AT5G39310 | TAIR:AT5G39310 | RefSeq:AT5G39310-TAIR-G | EnsemblPlants:AT5G39310.1 | TAIR:AT5G39310.1 |
| Symbol:ATEXPA24 | ProteinID:BAB09386.1 | EMBL:DQ056700 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 |
| GO:GO:0071555 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | RefSeq:NP_198747.2 |
| PFAM:PF01357 | PFAM:PF03330 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009030 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01225 |
| PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF70 | UniProt:Q9FL76 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| UniParc:UPI000012A2BF | SEG:seg | : | : | : | : |
Description
EXPA24Expansin-A24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL76]
Coordinates
chr5:-:15739032..15740605
Molecular Weight (calculated)
33776.6 Da
IEP (calculated)
9.452
GRAVY (calculated)
-0.330
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLKRKLYA KILMMVMVIW IAPMTNGHDH ASHVPGGRPG AHPSHGAHPA HGAHPSHGAH PSHGAHPSHG AHPSHGALPS HGGQVPHSGW GHGRATFYGD
101: INGGETQQGA CGYGDLHKQG YGLETAALST ALFNNGSRCG ACYEIMCEHA PQWCLPGSIK ITATNFCPPD FTKPNDNWCN PPQKHFDLSQ PMFLKIAKYK
201: AGVVPVKFRR VPCAKIGGVK FEIKGNPHFL MILPYNVGGA GAVRAMQIKG TRTQWIAMKK NWGQIWSTGV VLTGQCLSFR LTTSDGVMKE FIDVTPPDWK
301: CNGQSFDGKV NF
101: INGGETQQGA CGYGDLHKQG YGLETAALST ALFNNGSRCG ACYEIMCEHA PQWCLPGSIK ITATNFCPPD FTKPNDNWCN PPQKHFDLSQ PMFLKIAKYK
201: AGVVPVKFRR VPCAKIGGVK FEIKGNPHFL MILPYNVGGA GAVRAMQIKG TRTQWIAMKK NWGQIWSTGV VLTGQCLSFR LTTSDGVMKE FIDVTPPDWK
301: CNGQSFDGKV NF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.