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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97663 Canola extracellular 80.5 90.44
Bra027249.1-P Field mustard cytosol, extracellular, plastid 73.76 90.43
CDX98555 Canola extracellular 79.79 89.64
Bra001593.1-P Field mustard extracellular 79.43 89.24
CDX82436 Canola extracellular 79.43 89.24
CDX75827 Canola extracellular 69.86 88.74
KRH26080 Soybean extracellular 59.22 65.23
KRH55327 Soybean extracellular 59.22 64.98
GSMUA_Achr1P00140_001 Banana extracellular 54.26 62.96
VIT_19s0014g02910.t01 Wine grape extracellular 56.03 61.48
Solyc07g063210.2.1 Tomato extracellular 54.96 60.55
Os10t0439100-00 Rice extracellular 46.81 51.76
TraesCS1B01G156700.1 Wheat extracellular 45.04 50.4
Zm00001d035101_P001 Maize extracellular 37.59 50.0
TraesCS3D01G313100.1 Wheat extracellular 43.97 49.8
Zm00001d035104_P001 Maize cytosol, extracellular, plastid 36.88 49.06
TraesCS3D01G313400.1 Wheat extracellular 43.26 49.0
TraesCS3D01G313300.1 Wheat extracellular 42.2 48.77
TraesCS3A01G317900.1 Wheat extracellular 42.91 48.59
TraesCS3B01G347900.1 Wheat extracellular 42.91 48.59
TraesCS3B01G348000.1 Wheat extracellular 42.91 48.59
Os06t0718100-01 Rice plastid 45.04 48.29
HORVU3Hr1G076620.1 Barley extracellular 42.55 48.19
HORVU3Hr1G076640.2 Barley extracellular 42.55 48.19
HORVU3Hr1G076670.1 Barley extracellular 42.55 48.19
Os01t0249100-00 Rice extracellular 37.23 48.17
Zm00001d032886_P001 Maize extracellular 42.91 48.02
Zm00001d032885_P001 Maize plastid 35.82 47.87
Os03t0155900-01 Rice extracellular 42.2 47.79
TraesCS3A01G165900.1 Wheat extracellular 41.84 47.77
Os03t0428700-01 Rice extracellular 43.26 47.66
Os03t0156000-00 Rice extracellular 41.84 47.39
TraesCS3A01G318000.1 Wheat extracellular 41.84 47.39
TraesCS3D01G313200.1 Wheat extracellular 41.84 47.39
TraesCS4D01G271800.1 Wheat extracellular 41.84 47.39
Os05t0277000-00 Rice extracellular 41.49 47.18
HORVU5Hr1G121370.1 Barley extracellular 42.55 47.06
Os05t0276500-01 Rice extracellular 42.55 47.06
TraesCS5B01G548500.1 Wheat extracellular 42.55 47.06
TraesCS4A01G032600.1 Wheat extracellular 42.2 47.04
TraesCS4B01G272700.1 Wheat extracellular 42.2 47.04
TraesCS4B01G272800.1 Wheat extracellular 42.2 47.04
TraesCS4D01G271700.1 Wheat extracellular 42.2 47.04
TraesCS4D01G271900.1 Wheat extracellular 42.2 47.04
Os01t0248900-01 Rice extracellular 41.84 47.01
TraesCS3B01G199900.1 Wheat extracellular 41.84 47.01
TraesCS3D01G175800.1 Wheat extracellular 41.84 47.01
TraesCS3A01G318100.1 Wheat extracellular 41.49 46.99
Zm00001d035111_P001 Maize extracellular 42.2 46.85
Os03t0156300-00 Rice extracellular 39.72 46.67
TraesCS4A01G339200.1 Wheat extracellular 42.2 46.67
TraesCS5D01G535500.1 Wheat extracellular 42.2 46.67
EER91570 Sorghum extracellular 41.49 46.61
Zm00001d035100_P001 Maize extracellular 42.2 46.48
Zm00001d035102_P001 Maize extracellular 41.84 46.46
Zm00001d035108_P001 Maize extracellular 41.84 46.46
EER91571 Sorghum extracellular 41.49 46.25
EER94179 Sorghum extracellular 41.49 46.25
HORVU4Hr1G072660.1 Barley extracellular 41.49 46.25
KXG38462 Sorghum extracellular 41.49 46.25
TraesCS4B01G272600.1 Wheat extracellular 41.49 46.25
EES02683 Sorghum extracellular 41.49 46.06
Zm00001d040249_P001 Maize extracellular 41.13 46.03
Zm00001d032882_P001 Maize extracellular 41.84 45.91
TraesCS3D01G176000.1 Wheat extracellular 41.49 45.88
TraesCS5D01G527700.1 Wheat extracellular 41.49 45.88
EES02419 Sorghum extracellular 41.13 45.85
TraesCS4A01G345100.1 Wheat extracellular 36.52 45.78
TraesCS1A01G406900.1 Wheat extracellular 41.13 45.67
TraesCS4A01G034200.1 Wheat extracellular 41.13 45.67
TraesCS4A01G345000.1 Wheat extracellular 41.13 45.67
Zm00001d035109_P001 Maize extracellular 41.13 45.67
HORVU4Hr1G072440.1 Barley extracellular 40.78 45.28
TraesCS4D01G270500.1 Wheat extracellular 40.78 45.28
TraesCS5B01G528500.1 Wheat extracellular 40.78 45.28
Zm00001d032884_P001 Maize extracellular 40.43 45.24
TraesCS3A01G165600.1 Wheat extracellular 40.78 45.1
TraesCS3B01G200100.1 Wheat extracellular 40.78 45.1
Zm00001d035112_P001 Maize extracellular 32.62 45.1
TraesCS1A01G406800.1 Wheat extracellular 40.78 44.92
HORVU5Hr1G119860.2 Barley extracellular 40.43 44.88
TraesCS4B01G271300.1 Wheat extracellular 40.43 44.88
TraesCS5B01G528700.1 Wheat extracellular 40.07 44.14
EES13271 Sorghum extracellular 40.07 43.63
TraesCS5D01G527800.1 Wheat extracellular 39.36 43.36
HORVU4Hr1G072580.1 Barley extracellular 42.2 43.27
EES13270 Sorghum extracellular 39.72 43.08
AT1G62980.1 Thale cress extracellular 38.65 42.41
Zm00001d040247_P001 Maize extracellular 42.91 42.31
HORVU3Hr1G034030.1 Barley extracellular, plasma membrane, plastid 42.55 42.11
TraesCS5B01G528600.1 Wheat extracellular, plastid, vacuole 25.89 41.95
TraesCS3A01G031700.1 Wheat extracellular 30.5 41.55
EES14433 Sorghum plastid 40.07 40.65
HORVU5Hr1G119680.4 Barley extracellular 40.78 40.64
HORVU5Hr1G119670.1 Barley extracellular 40.43 40.57
HORVU3Hr1G076630.1 Barley extracellular 31.91 40.36
AT5G39270.1 Thale cress extracellular 39.36 39.78
AT5G39290.1 Thale cress extracellular 39.36 39.78
AT1G12560.1 Thale cress extracellular 36.88 39.69
EER94181 Sorghum extracellular, plastid, vacuole 40.78 39.52
Zm00001d032883_P001 Maize extracellular 40.07 38.57
AT5G39280.1 Thale cress extracellular 37.59 38.55
KXG29998 Sorghum extracellular 25.89 38.42
AT5G39300.1 Thale cress extracellular 37.59 38.41
AT5G39260.1 Thale cress extracellular 35.46 38.17
PGSC0003DMT400032334 Potato cytosol, nucleus, vacuole 55.67 35.28
TraesCS5B01G528400.1 Wheat extracellular 20.92 33.91
HORVU0Hr1G032890.2 Barley extracellular 23.4 32.35
TraesCS3D01G030100.1 Wheat extracellular 22.7 31.22
AT5G39310.1 Thale cress extracellular 33.69 30.45
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.1EntrezGene:820776UniProt:A0A1I9LSN2ProteinID:ANM65590.1
ArrayExpress:AT3G15370EnsemblPlantsGene:AT3G15370RefSeq:AT3G15370TAIR:AT3G15370RefSeq:AT3G15370-TAIR-GEnsemblPlants:AT3G15370.2
Symbol:ATEXPA12InterPro:Expan_Lol_pIInterPro:ExpansinInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0008150GO:GO:0009664
GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0030312InterPro:IPR007112InterPro:IPR007117
InterPro:IPR036749InterPro:IPR036908RefSeq:NP_001327548.1PFAM:PF01357PFAM:PF03330PRINTS:PR01225
PRINTS:PR01226PFscan:PS50842PFscan:PS50843PANTHER:PTHR31867PANTHER:PTHR31867:SF24InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685TMHMM:TMhelixUniParc:UPI000848E30E
SEG:seg:::::
Description
ATEXPA12Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2]
Coordinates
chr3:+:5190554..5192169
Molecular Weight (calculated)
31338.7 Da
IEP (calculated)
10.573
GRAVY (calculated)
-0.144
Length
282 amino acids
Sequence
(BLAST)
001: MDMKGTYLVT VILLVSTLSV GMCSNGWIRA HATYYGVNDS PASLGKKAIK LLFNIRFCYF KVCMVNLFFR YNFIGGACGY DNPYHAGFGA HTAALSGELF
101: RSGESCGGCY QVRCDFPADP KWCLRGAAVT VTATNFCPTN NNNGWCNLPR HHFDMSSPAF FRIARRGNEG IVPVFYRRVG CKRRGGVRFT MRGQGNFNMV
201: MISNVGGGGS VRSVAVRGSK GKTWLQMTRN WGANWQSSGD LRGQRLSFKV TLTDSKTQTF LNVVPSSWWF GQTFSSRGRQ FV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.