Factsheet for TraesCS3A01G031700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66063	Canola	cytosol, extracellular, plastid	52.17	65.45
Bra016473.1-P	Field mustard	extracellular	48.31	58.82
Os06t0718100-01	Rice	plastid	62.8	49.43
TraesCS4A01G032600.1	Wheat	extracellular	57.0	46.64
TraesCS3A01G165900.1	Wheat	extracellular	55.56	46.56
KRH51669	Soybean	extracellular	54.59	44.84
TraesCS4A01G339200.1	Wheat	extracellular	54.59	44.31
TraesCS3A01G317900.1	Wheat	extracellular	52.66	43.78
TraesCS1A01G406800.1	Wheat	extracellular	54.11	43.75
TraesCS4A01G345000.1	Wheat	extracellular	53.14	43.31
TraesCS1A01G406900.1	Wheat	extracellular	53.14	43.31
TraesCS3A01G318000.1	Wheat	extracellular	51.69	42.97
TraesCS3A01G318100.1	Wheat	extracellular	51.21	42.57
TraesCS4A01G034200.1	Wheat	extracellular	52.17	42.52
TraesCS4A01G345100.1	Wheat	extracellular	43.96	40.44
TraesCS3A01G165600.1	Wheat	extracellular	49.28	40.0
TraesCS1A01G199400.1	Wheat	extracellular	43.0	34.36
Solyc07g063210.2.1	Tomato	extracellular	40.1	32.42
TraesCS7A01G022400.1	Wheat	extracellular	43.48	32.26
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	43.0	31.67
TraesCS4A01G470100.1	Wheat	extracellular	42.03	31.41
VIT_19s0014g02910.t01	Wine grape	extracellular	38.16	30.74
AT3G15370.2	Thale cress	extracellular	41.55	30.5
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	40.58	18.88

Protein Annotations

Gene3D:2.40.40.10	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PANTHER:PTHR31867	PANTHER:PTHR31867:SF19	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G031700	EnsemblPlants:TraesCS3A01G031700.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:17451975..17452967

Molecular Weight (calculated)

21874.1 Da

IEP (calculated)

7.976

GRAVY (calculated)

0.019

Length

207 amino acids

Sequence
(BLAST)

001: MARARVVAVV LLAVGSLLLS AAADTATAPS PQPFVWQKAH ATFYGGADAS DTMGGACGYG NLFAEGYGTR TVALSTVLFN DGAACGQCYK IACDRKRADP
101: LFCKPGVTVT VTATNFCPPN DALPNDNGGW CNTPRPHFDM AQPAWEKIGV YKGGIIPVMY QRVPCVKRGG VRFRINGHDY FNLVLVSNVA AAGSIKSMDV
201: NSSDSED

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.