Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26080 | Soybean | extracellular | 74.32 | 74.61 |
| KRH55327 | Soybean | extracellular | 74.32 | 74.32 |
| GSMUA_Achr1P00140_001 | Banana | extracellular | 65.76 | 69.55 |
| Bra027249.1-P | Field mustard | cytosol, extracellular, plastid | 61.87 | 69.13 |
| Solyc07g063210.2.1 | Tomato | extracellular | 66.54 | 66.8 |
| CDX75827 | Canola | extracellular | 56.42 | 65.32 |
| CDX97663 | Canola | extracellular | 62.65 | 64.14 |
| CDX98555 | Canola | extracellular | 62.65 | 64.14 |
| Bra001593.1-P | Field mustard | extracellular | 61.48 | 62.95 |
| CDX82436 | Canola | extracellular | 61.09 | 62.55 |
| AT3G15370.2 | Thale cress | extracellular | 61.48 | 56.03 |
| TraesCS1B01G156700.1 | Wheat | extracellular | 48.25 | 49.21 |
| Zm00001d032885_P001 | Maize | plastid | 38.91 | 47.39 |
| Os03t0428700-01 | Rice | extracellular | 47.08 | 47.27 |
| Zm00001d035101_P001 | Maize | extracellular | 38.91 | 47.17 |
| TraesCS3D01G175800.1 | Wheat | extracellular | 45.91 | 47.01 |
| HORVU3Hr1G076670.1 | Barley | extracellular | 45.53 | 46.99 |
| TraesCS3A01G317900.1 | Wheat | extracellular | 45.53 | 46.99 |
| TraesCS3D01G313100.1 | Wheat | extracellular | 45.53 | 46.99 |
| TraesCS3D01G313400.1 | Wheat | extracellular | 45.53 | 46.99 |
| TraesCS3D01G313300.1 | Wheat | extracellular | 44.36 | 46.72 |
| Os10t0439100-00 | Rice | extracellular | 46.3 | 46.67 |
| HORVU3Hr1G076620.1 | Barley | extracellular | 45.14 | 46.59 |
| HORVU3Hr1G076640.2 | Barley | extracellular | 45.14 | 46.59 |
| TraesCS3A01G165900.1 | Wheat | extracellular | 44.75 | 46.56 |
| Os01t0249100-00 | Rice | extracellular | 39.3 | 46.33 |
| Os05t0276500-01 | Rice | extracellular | 45.91 | 46.27 |
| Zm00001d035104_P001 | Maize | cytosol, extracellular, plastid | 38.13 | 46.23 |
| TraesCS3B01G199900.1 | Wheat | extracellular | 45.14 | 46.22 |
| VIT_14s0068g00600.t01 | Wine grape | extracellular | 45.14 | 46.22 |
| TraesCS3A01G318000.1 | Wheat | extracellular | 44.75 | 46.18 |
| TraesCS3B01G347900.1 | Wheat | extracellular | 44.75 | 46.18 |
| Os05t0277000-00 | Rice | extracellular | 44.36 | 45.97 |
| Os01t0248900-01 | Rice | extracellular | 44.75 | 45.82 |
| TraesCS3A01G318100.1 | Wheat | extracellular | 44.36 | 45.78 |
| TraesCS3B01G348000.1 | Wheat | extracellular | 44.36 | 45.78 |
| TraesCS3D01G313200.1 | Wheat | extracellular | 44.36 | 45.78 |
| Zm00001d032886_P001 | Maize | extracellular | 44.75 | 45.63 |
| HORVU5Hr1G121370.1 | Barley | extracellular | 45.14 | 45.49 |
| TraesCS1A01G406900.1 | Wheat | extracellular | 44.75 | 45.28 |
| TraesCS4A01G345000.1 | Wheat | extracellular | 44.75 | 45.28 |
| Zm00001d032882_P001 | Maize | extracellular | 45.14 | 45.14 |
| TraesCS5B01G548500.1 | Wheat | extracellular | 44.75 | 45.1 |
| TraesCS5D01G527700.1 | Wheat | extracellular | 44.75 | 45.1 |
| TraesCS4A01G345100.1 | Wheat | extracellular | 39.3 | 44.89 |
| TraesCS5B01G528500.1 | Wheat | extracellular | 44.36 | 44.88 |
| Os06t0718100-01 | Rice | plastid | 45.91 | 44.87 |
| TraesCS4A01G339200.1 | Wheat | extracellular | 44.36 | 44.71 |
| TraesCS5D01G535500.1 | Wheat | extracellular | 44.36 | 44.71 |
| EER91571 | Sorghum | extracellular | 43.97 | 44.66 |
| EER94179 | Sorghum | extracellular | 43.97 | 44.66 |
| EER91570 | Sorghum | extracellular | 43.58 | 44.62 |
| Zm00001d035111_P001 | Maize | extracellular | 43.97 | 44.49 |
| TraesCS3B01G200100.1 | Wheat | extracellular | 43.97 | 44.31 |
| Os03t0155900-01 | Rice | extracellular | 42.8 | 44.18 |
| TraesCS1A01G406800.1 | Wheat | extracellular | 43.97 | 44.14 |
| HORVU4Hr1G072440.1 | Barley | extracellular | 43.58 | 44.09 |
| HORVU5Hr1G119860.2 | Barley | extracellular | 43.58 | 44.09 |
| TraesCS4A01G034200.1 | Wheat | extracellular | 43.58 | 44.09 |
| TraesCS4D01G270500.1 | Wheat | extracellular | 43.58 | 44.09 |
| TraesCS3A01G165600.1 | Wheat | extracellular | 43.58 | 43.92 |
| TraesCS3D01G176000.1 | Wheat | extracellular | 43.58 | 43.92 |
| EES02419 | Sorghum | extracellular | 43.19 | 43.87 |
| TraesCS4D01G271800.1 | Wheat | extracellular | 42.41 | 43.78 |
| TraesCS5B01G528700.1 | Wheat | extracellular | 43.58 | 43.75 |
| Zm00001d035100_P001 | Maize | extracellular | 43.58 | 43.75 |
| EES02683 | Sorghum | extracellular | 43.19 | 43.7 |
| TraesCS4B01G271300.1 | Wheat | extracellular | 43.19 | 43.7 |
| Zm00001d032884_P001 | Maize | extracellular | 42.8 | 43.65 |
| Os03t0156000-00 | Rice | extracellular | 42.02 | 43.37 |
| TraesCS5D01G527800.1 | Wheat | extracellular | 43.19 | 43.36 |
| Zm00001d035102_P001 | Maize | extracellular | 42.8 | 43.31 |
| Zm00001d035108_P001 | Maize | extracellular | 42.8 | 43.31 |
| Zm00001d040249_P001 | Maize | extracellular | 42.41 | 43.25 |
| TraesCS4A01G032600.1 | Wheat | extracellular | 42.41 | 43.08 |
| TraesCS4B01G272800.1 | Wheat | extracellular | 42.41 | 43.08 |
| TraesCS4D01G271700.1 | Wheat | extracellular | 42.41 | 43.08 |
| TraesCS4D01G271900.1 | Wheat | extracellular | 42.41 | 43.08 |
| VIT_07s0005g04850.t01 | Wine grape | extracellular | 40.08 | 42.92 |
| HORVU4Hr1G072660.1 | Barley | extracellular | 42.02 | 42.69 |
| TraesCS4B01G272600.1 | Wheat | extracellular | 42.02 | 42.69 |
| TraesCS4B01G272700.1 | Wheat | extracellular | 42.02 | 42.69 |
| Zm00001d035109_P001 | Maize | extracellular | 42.02 | 42.52 |
| KXG38462 | Sorghum | extracellular | 41.63 | 42.29 |
| Zm00001d035112_P001 | Maize | extracellular | 33.46 | 42.16 |
| Os03t0156300-00 | Rice | extracellular | 39.3 | 42.08 |
| HORVU3Hr1G034030.1 | Barley | extracellular, plasma membrane, plastid | 46.3 | 41.75 |
| EES13271 | Sorghum | extracellular | 42.02 | 41.7 |
| Zm00001d040247_P001 | Maize | extracellular | 45.91 | 41.26 |
| EES13270 | Sorghum | extracellular | 41.63 | 41.15 |
| TraesCS5B01G528600.1 | Wheat | extracellular, plastid, vacuole | 27.63 | 40.8 |
| HORVU4Hr1G072580.1 | Barley | extracellular | 43.19 | 40.36 |
| VIT_02s0025g04700.t01 | Wine grape | extracellular | 41.25 | 40.15 |
| HORVU5Hr1G119670.1 | Barley | extracellular | 43.58 | 39.86 |
| HORVU5Hr1G119680.4 | Barley | extracellular | 43.58 | 39.58 |
| PGSC0003DMT400032334 | Potato | cytosol, nucleus, vacuole | 68.48 | 39.55 |
| EER94181 | Sorghum | extracellular, plastid, vacuole | 44.75 | 39.52 |
| Zm00001d032883_P001 | Maize | extracellular | 44.75 | 39.25 |
| HORVU3Hr1G076630.1 | Barley | extracellular | 33.46 | 38.56 |
| KXG29998 | Sorghum | extracellular | 28.4 | 38.42 |
| TraesCS3A01G031700.1 | Wheat | extracellular | 30.74 | 38.16 |
| EES14433 | Sorghum | plastid | 41.25 | 38.13 |
| TraesCS5B01G528400.1 | Wheat | extracellular | 22.96 | 33.91 |
| HORVU0Hr1G032890.2 | Barley | extracellular | 26.07 | 32.84 |
| TraesCS3D01G030100.1 | Wheat | extracellular | 24.9 | 31.22 |
Protein Annotations
| EntrezGene:100260630 | wikigene:100260630 | Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | ProteinID:CBI20321 |
| ProteinID:CBI20321.3 | UniProt:E0CSM2 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | EMBL:FN595229 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | EntrezGene:LOC100260630 | wikigene:LOC100260630 |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31867 | PANTHER:PTHR31867:SF24 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 |
| SUPFAM:SSF50685 | SignalP:SignalP-TM | UniParc:UPI00015C7B51 | ArrayExpress:VIT_19s0014g02910 | EnsemblPlantsGene:VIT_19s0014g02910 | EnsemblPlants:VIT_19s0014g02910.t01 |
| RefSeq:XP_002282241 | RefSeq:XP_002282241.1 | : | : | : | : |
Description
No Description!
Coordinates
chr19:+:3020095..3021255
Molecular Weight (calculated)
28434.8 Da
IEP (calculated)
8.756
GRAVY (calculated)
-0.071
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MFAIHFSSHF LWRFFFVVGV VLEGIGHGLA DGWFDAHATF YGANQSPSTL GGACGYDNTV HAGFGVNTAA VSGALFRQGE ACGACYLVMC NYWLDPKWCL
101: HRATVTITAT NFCPPNNNGG WCDPPRQHFD MSMPAFLRMA RQGNEGIVPV LYKRISCKRR GGVHFTLKGQ SNFNMVMISN VGGSGDVRAA WIRGSRTGTW
201: VAMHRNWGAN WQSSVDLRSQ NLSFKLTLVD GKTLEFYNVV PSTWSFGQTF ASENQFT
101: HRATVTITAT NFCPPNNNGG WCDPPRQHFD MSMPAFLRMA RQGNEGIVPV LYKRISCKRR GGVHFTLKGQ SNFNMVMISN VGGSGDVRAA WIRGSRTGTW
201: VAMHRNWGAN WQSSVDLRSQ NLSFKLTLVD GKTLEFYNVV PSTWSFGQTF ASENQFT
001: MDMKGTYLVT VILLVSTLSV GMCSNGWIRA HATYYGVNDS PASLGGACGY DNPYHAGFGA HTAALSGELF RSGESCGGCY QVRCDFPADP KWCLRGAAVT
101: VTATNFCPTN NNNGWCNLPR HHFDMSSPAF FRIARRGNEG IVPVFYRRVG CKRRGGVRFT MRGQGNFNMV MISNVGGGGS VRSVAVRGSK GKTWLQMTRN
201: WGANWQSSGD LRGQRLSFKV TLTDSKTQTF LNVVPSSWWF GQTFSSRGRQ FV
101: VTATNFCPTN NNNGWCNLPR HHFDMSSPAF FRIARRGNEG IVPVFYRRVG CKRRGGVRFT MRGQGNFNMV MISNVGGGGS VRSVAVRGSK GKTWLQMTRN
201: WGANWQSSGD LRGQRLSFKV TLTDSKTQTF LNVVPSSWWF GQTFSSRGRQ FV
Arabidopsis Description
ATEXPA12Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.