Factsheet for HORVU3Hr1G076630.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G076620.1	Barley	extracellular	87.89	78.71
HORVU3Hr1G076670.1	Barley	extracellular	87.44	78.31
TraesCS3A01G317900.1	Wheat	extracellular	87.0	77.91
HORVU3Hr1G076640.2	Barley	extracellular	86.1	77.11
TraesCS3D01G313400.1	Wheat	extracellular	85.2	76.31
TraesCS3D01G313300.1	Wheat	extracellular	83.41	76.23
TraesCS3D01G313200.1	Wheat	extracellular	84.75	75.9
TraesCS3D01G313100.1	Wheat	extracellular	84.75	75.9
TraesCS3B01G347900.1	Wheat	extracellular	84.3	75.5
TraesCS3B01G348000.1	Wheat	extracellular	84.3	75.5
TraesCS3A01G318100.1	Wheat	extracellular	83.86	75.1
TraesCS3A01G318000.1	Wheat	extracellular	83.86	75.1
GSMUA_Achr11P...	Banana	extracellular	61.44	54.8
HORVU5Hr1G121370.1	Barley	extracellular	58.74	51.37
HORVU0Hr1G032890.2	Barley	extracellular	46.64	50.98
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	65.02	50.88
HORVU5Hr1G119860.2	Barley	extracellular	52.02	45.67
HORVU4Hr1G072660.1	Barley	extracellular	51.57	45.45
HORVU1Hr1G036910.1	Barley	extracellular	24.66	44.72
HORVU4Hr1G072440.1	Barley	extracellular	49.33	43.31
HORVU4Hr1G072580.1	Barley	extracellular	52.47	42.55
HORVU5Hr1G119670.1	Barley	extracellular	52.91	41.99
HORVU5Hr1G119680.4	Barley	extracellular	52.47	41.34
Solyc07g063210.2.1	Tomato	extracellular	40.36	35.16
VIT_19s0014g02910.t01	Wine grape	extracellular	38.56	33.46
HORVU7Hr1G075680.1	Barley	extracellular	38.56	33.33
AT3G15370.2	Thale cress	extracellular	40.36	31.91
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	19.73	30.14
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	19.28	28.86
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	34.53	23.12
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	40.36	20.22
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	26.01	19.33
HORVU1Hr1G051590.1	Barley	plastid	18.83	14.0

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:A0A287LRI9	ncoils:Coil	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	EnsemblPlantsGene:HORVU3Hr1G076630	EnsemblPlants:HORVU3Hr1G076630.1	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF32	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B486E44	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:-:569014663..569015522

Molecular Weight (calculated)

21241.1 Da

IEP (calculated)

7.717

GRAVY (calculated)

0.052

Length

223 amino acids

Sequence
(BLAST)

001: TEMESPSLLL LITLLAFAFK ASVAQWTPAF ATFYGGSDAS DTMGGACGYG NLYNAGYGVN SAALSTALFN NGASCGMCFT ITCDASKTQS CKQGTSITIT
101: PAWETIAIYQ AGIVPVNYKR VPCQRSGGMR FTINGNDYFE LVTVANVGGS GVVSQMWIKG SKTDWMVMSR NWGASWQSNA YLNGQSLSFR VQTDDGRVVX
201: XXXXXXXXXX XXXXXXXXXX XXX

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.