Factsheet for HORVU5Hr1G121370.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G535500.1	Wheat	extracellular	94.51	94.51
TraesCS5B01G548500.1	Wheat	extracellular	94.12	94.12
TraesCS4A01G339200.1	Wheat	extracellular	93.33	93.33
Os05t0277000-00	Rice	extracellular	71.37	73.39
HORVU3Hr1G076620.1	Barley	extracellular	67.45	69.08
HORVU3Hr1G076640.2	Barley	extracellular	67.06	68.67
HORVU3Hr1G076670.1	Barley	extracellular	67.06	68.67
GSMUA_Achr11P...	Banana	extracellular	63.92	65.2
HORVU5Hr1G119860.2	Barley	extracellular	60.39	60.63
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	67.06	60.0
HORVU4Hr1G072660.1	Barley	extracellular	59.22	59.68
HORVU3Hr1G076630.1	Barley	extracellular	51.37	58.74
HORVU4Hr1G072440.1	Barley	extracellular	57.65	57.87
HORVU4Hr1G072580.1	Barley	extracellular	60.39	56.0
HORVU5Hr1G119670.1	Barley	extracellular	60.78	55.16
HORVU5Hr1G119680.4	Barley	extracellular	60.0	54.06
HORVU1Hr1G036910.1	Barley	extracellular	22.75	47.15
HORVU0Hr1G032890.2	Barley	extracellular	37.25	46.57
VIT_19s0014g02910.t01	Wine grape	extracellular	45.49	45.14
Solyc07g063210.2.1	Tomato	extracellular	44.31	44.14
AT3G15370.2	Thale cress	extracellular	47.06	42.55
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	23.92	41.78
HORVU7Hr1G075680.1	Barley	extracellular	41.57	41.09
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	23.92	40.94
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	41.57	31.83
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	34.9	29.67
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	45.1	25.84
HORVU1Hr1G051590.1	Barley	plastid	20.0	17.0

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A287SZ69	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030312	EnsemblPlantsGene:HORVU5Hr1G121370	EnsemblPlants:HORVU5Hr1G121370.1	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF32	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B487709	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:659463034..659464380

Molecular Weight (calculated)

27538.5 Da

IEP (calculated)

8.456

GRAVY (calculated)

-0.060

Length

255 amino acids

Sequence
(BLAST)

001: MGKQTAVALV LLGVLCGIAS HGVDAQYYWT SATATFYGGA DGSGTMGGAC GYGNLYGSGY GINNAALSTA LFNDGAMCGA CYIIYCDTGR SKMCRPGTQI
101: TVSATNFCPP NWALPSNNGG WCNPPRLHFD MSQPAWTSIA IYQAGIVPVM YKRVSCQKRD GIRFGISGRD YFELVVVTNV GGSGVVAQMW IKGSNTNWLA
201: MSRNWGANWQ SNAYLNGQRL SFRVRLDDGR EATASDVAPS NWWFGATYSS WINFY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.