Factsheet for HORVU5Hr1G119680.4

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G119860.2	Barley	extracellular	86.57	96.46
TraesCS5D01G527700.1	Wheat	extracellular	85.51	94.9
TraesCS4A01G345000.1	Wheat	extracellular	85.16	94.88
TraesCS1A01G406900.1	Wheat	extracellular	85.16	94.88
TraesCS5B01G528700.1	Wheat	extracellular	85.16	94.14
TraesCS5B01G528500.1	Wheat	extracellular	84.45	94.09
TraesCS5D01G527800.1	Wheat	extracellular	84.45	93.36
TraesCS1A01G406800.1	Wheat	extracellular	83.04	91.8
HORVU5Hr1G119670.1	Barley	extracellular	90.81	91.46
TraesCS4A01G345100.1	Wheat	extracellular	72.44	91.11
HORVU4Hr1G072440.1	Barley	extracellular	78.45	87.4
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	53.36	86.78
HORVU4Hr1G072660.1	Barley	extracellular	76.33	85.38
HORVU4Hr1G072580.1	Barley	extracellular	79.15	81.45
Os03t0156000-00	Rice	extracellular	62.9	71.49
Os03t0155900-01	Rice	extracellular	62.9	71.49
Zm00001d035101_P001	Maize	extracellular	53.36	71.23
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	53.0	70.75
Zm00001d035111_P001	Maize	extracellular	63.25	70.47
Os03t0156300-00	Rice	extracellular	59.72	70.42
Zm00001d035108_P001	Maize	extracellular	62.54	69.69
Zm00001d035102_P001	Maize	extracellular	62.54	69.69
Zm00001d035109_P001	Maize	extracellular	61.84	68.9
Zm00001d035100_P001	Maize	extracellular	62.19	68.75
EES13271	Sorghum	extracellular	62.19	67.95
Zm00001d035112_P001	Maize	extracellular	48.76	67.65
EES13270	Sorghum	extracellular	61.48	66.92
EES14433	Sorghum	plastid	62.19	63.31
HORVU3Hr1G076620.1	Barley	extracellular	54.77	62.25
HORVU3Hr1G076670.1	Barley	extracellular	54.42	61.85
HORVU3Hr1G076640.2	Barley	extracellular	54.06	61.45
HORVU5Hr1G121370.1	Barley	extracellular	54.06	60.0
CDY66063	Canola	cytosol, extracellular, plastid	34.63	59.39
KRH51669	Soybean	extracellular	51.94	58.33
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	53.36	52.98
HORVU3Hr1G076630.1	Barley	extracellular	41.34	52.47
Bra016473.1-P	Field mustard	extracellular	31.1	51.76
HORVU0Hr1G032890.2	Barley	extracellular	34.98	48.53
Solyc07g063210.2.1	Tomato	extracellular	42.05	46.48
HORVU1Hr1G036910.1	Barley	extracellular	19.43	44.72
VIT_19s0014g02910.t01	Wine grape	extracellular	39.58	43.58
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	21.55	41.78
HORVU7Hr1G075680.1	Barley	extracellular	37.81	41.47
AT3G15370.2	Thale cress	extracellular	40.64	40.78
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	20.85	39.6
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	36.4	30.93
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	30.04	28.33
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	41.34	26.29
HORVU1Hr1G051590.1	Barley	plastid	16.96	16.0

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A287SXJ0	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0030312	EnsemblPlantsGene:HORVU5Hr1G119680	EnsemblPlants:HORVU5Hr1G119680.4	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	TMHMM:TMhelix	UniParc:UPI000B474C9F	:

Description

No Description!

Coordinates

chrchr5H:-:656476845..656479526

Molecular Weight (calculated)

30959.9 Da

IEP (calculated)

8.143

GRAVY (calculated)

0.034

Length

283 amino acids

Sequence
(BLAST)

001: DSIATISSNL RGKLNHLISP CFWDTFSKKM AGRMCFLQLF TVVLAFCFMP AKSGYWLPAH ATFYGGADGS DTMGGACGYE NLYNAGYGIN NAALSTALFN
101: NGLSCGQCYL ITCDTSKSNM CKPGTSITVS ATNFCPPNWA LSSDNGGWCN PPRVHFDMSQ PAWENLAIYR AGIVPVLYQQ VACQRQGGLR FTINGFNYFE
201: LVLVTNIAMS GSIKSMSVKG TNTAWIPMSQ NWGANWQCLA GLKGQGLSFA ITSSGGQYKV FQDVVPAWWL FGQTFSTWQQ FDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.