Factsheet for HORVU0Hr1G032890.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G076640.2	Barley	extracellular	68.14	55.82
HORVU3Hr1G076620.1	Barley	extracellular	66.67	54.62
TraesCS3B01G347900.1	Wheat	extracellular	65.69	53.82
TraesCS3D01G313100.1	Wheat	extracellular	65.2	53.41
TraesCS3D01G313400.1	Wheat	extracellular	65.2	53.41
TraesCS3A01G317900.1	Wheat	extracellular	65.2	53.41
TraesCS3A01G318000.1	Wheat	extracellular	64.71	53.01
HORVU3Hr1G076670.1	Barley	extracellular	64.71	53.01
TraesCS3A01G318100.1	Wheat	extracellular	64.71	53.01
TraesCS3D01G313200.1	Wheat	extracellular	64.71	53.01
TraesCS3B01G348000.1	Wheat	extracellular	64.71	53.01
TraesCS3D01G313300.1	Wheat	extracellular	62.25	52.05
HORVU3Hr1G076630.1	Barley	extracellular	50.98	46.64
HORVU1Hr1G036910.1	Barley	extracellular	25.49	42.28
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	28.92	40.41
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	28.92	39.6
GSMUA_Achr11P...	Banana	extracellular	47.06	38.4
HORVU5Hr1G119860.2	Barley	extracellular	47.55	38.19
HORVU4Hr1G072660.1	Barley	extracellular	47.06	37.94
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	52.94	37.89
HORVU5Hr1G121370.1	Barley	extracellular	46.57	37.25
HORVU4Hr1G072440.1	Barley	extracellular	44.61	35.83
HORVU5Hr1G119670.1	Barley	extracellular	48.53	35.23
HORVU5Hr1G119680.4	Barley	extracellular	48.53	34.98
HORVU4Hr1G072580.1	Barley	extracellular	47.06	34.91
Solyc07g063210.2.1	Tomato	extracellular	34.8	27.73
VIT_19s0014g02910.t01	Wine grape	extracellular	32.84	26.07
HORVU7Hr1G075680.1	Barley	extracellular	31.37	24.81
AT3G15370.2	Thale cress	extracellular	32.35	23.4
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	31.86	21.67
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	31.86	19.52
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	34.31	15.73
HORVU1Hr1G051590.1	Barley	plastid	15.2	10.33

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	UniProt:A0A287EB40	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:HORVU0Hr1G032890	EnsemblPlants:HORVU0Hr1G032890.2	InterPro:IPR007112	InterPro:IPR036908	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PANTHER:PTHR31867	PANTHER:PTHR31867:SF32	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000B474F48	SEG:seg	:

Description

No Description!

Coordinates

chrchrUn:-:197577966..197578971

Molecular Weight (calculated)

17027.0 Da

IEP (calculated)

5.613

GRAVY (calculated)

-0.048

Length

204 amino acids

Sequence
(BLAST)

001: EMETPSLLLL TTMLACAFKA SVAQWTPAFA TFYGGSDASD TMGGACGYGN LYNAGYGVNS AALSTALFNN GASCGMCFTI TCDASKTRSC KQGTSITITA
101: TNFCPPNYAL ASDNGGWCNP PRKHFDMSQP AWXXXAIYQA GXLXXPXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXCIEDPTET RSHLATNYGP
201: VGLK

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.