Factsheet for HORVU3Hr1G076670.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G076620.1	Barley	extracellular	98.39	98.39
TraesCS3A01G317900.1	Wheat	extracellular	97.19	97.19
HORVU3Hr1G076640.2	Barley	extracellular	96.79	96.79
TraesCS3D01G313400.1	Wheat	extracellular	96.39	96.39
TraesCS3A01G318000.1	Wheat	extracellular	95.98	95.98
TraesCS3D01G313300.1	Wheat	extracellular	93.98	95.9
TraesCS3D01G313200.1	Wheat	extracellular	95.58	95.58
TraesCS3D01G313100.1	Wheat	extracellular	95.58	95.58
TraesCS3B01G348000.1	Wheat	extracellular	95.58	95.58
TraesCS3A01G318100.1	Wheat	extracellular	95.18	95.18
TraesCS3B01G347900.1	Wheat	extracellular	95.18	95.18
HORVU3Hr1G076630.1	Barley	extracellular	78.31	87.44
GSMUA_Achr11P...	Banana	extracellular	70.28	70.0
HORVU5Hr1G121370.1	Barley	extracellular	68.67	67.06
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	75.5	65.96
HORVU0Hr1G032890.2	Barley	extracellular	53.01	64.71
HORVU5Hr1G119860.2	Barley	extracellular	61.45	60.24
HORVU4Hr1G072660.1	Barley	extracellular	60.64	59.68
HORVU4Hr1G072440.1	Barley	extracellular	58.23	57.09
HORVU4Hr1G072580.1	Barley	extracellular	61.45	55.64
HORVU5Hr1G119670.1	Barley	extracellular	62.25	55.16
HORVU5Hr1G119680.4	Barley	extracellular	61.85	54.42
HORVU1Hr1G036910.1	Barley	extracellular	23.29	47.15
Solyc07g063210.2.1	Tomato	extracellular	48.19	46.88
VIT_19s0014g02910.t01	Wine grape	extracellular	46.99	45.53
HORVU7Hr1G075680.1	Barley	extracellular	44.18	42.64
AT3G15370.2	Thale cress	extracellular	48.19	42.55
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	23.69	40.41
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	22.89	38.26
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	41.77	31.23
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	34.54	28.67
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	47.79	26.74
HORVU1Hr1G051590.1	Barley	plastid	19.28	16.0

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A287LRJ9	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030312	EnsemblPlantsGene:HORVU3Hr1G076670	EnsemblPlants:HORVU3Hr1G076670.1	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF32	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B469F0B	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:569329075..569330103

Molecular Weight (calculated)

26998.7 Da

IEP (calculated)

6.975

GRAVY (calculated)

-0.088

Length

249 amino acids

Sequence
(BLAST)

001: MESPSLLLLI TLLAFAFKAS IAQWMPAFAT FYGGSDASDT MGGACGYGNL YNAGYGVNSA ALSTALFNNG ASCGMCFTIT CDASKTQSCK QGTSITITAT
101: NFCPPNYALA SDNGGWCNPP RQHFDMSQPA WETIAIYQAG IVPVNYKRVP CQRSGGMRFT INGNDYFELV TVANVGGSGV VSQMWIKGSK TDWMVMSRNW
201: GASWQSNAYL NGQSLSFRVQ TDDGRVVTAD NVAPYNWWFG GTYTSWQQF

Best Arabidopsis Sequence Match ( AT4G01630.1 )
(BLAST)

001: MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI
101: TITATNFCPP NFAQASDNGG WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV AGGGEISKVW IKGSKSNKWE
201: TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP SNWRFGQSFK SNVNF

Arabidopsis Description

EXPA17EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.