Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g063210.2.1 | Tomato | extracellular | 51.24 | 89.06 |
| VIT_19s0014g02910.t01 | Wine grape | extracellular | 39.55 | 68.48 |
| Bra027249.1-P | Field mustard | cytosol, extracellular, plastid | 35.28 | 68.26 |
| KRH26080 | Soybean | extracellular | 38.88 | 67.58 |
| CDX75827 | Canola | extracellular | 33.48 | 67.12 |
| KRH55327 | Soybean | extracellular | 38.65 | 66.93 |
| GSMUA_Achr1P00140_001 | Banana | extracellular | 35.96 | 65.84 |
| CDX97663 | Canola | extracellular | 35.96 | 63.74 |
| CDX98555 | Canola | extracellular | 35.96 | 63.74 |
| Bra001593.1-P | Field mustard | extracellular | 35.51 | 62.95 |
| CDX82436 | Canola | extracellular | 35.28 | 62.55 |
| AT3G15370.2 | Thale cress | extracellular | 35.28 | 55.67 |
| Zm00001d035101_P001 | Maize | extracellular | 24.04 | 50.47 |
| TraesCS1B01G156700.1 | Wheat | extracellular | 28.09 | 49.6 |
| Zm00001d035104_P001 | Maize | cytosol, extracellular, plastid | 23.6 | 49.53 |
| Os03t0155900-01 | Rice | extracellular | 27.42 | 49.0 |
| Os05t0277000-00 | Rice | extracellular | 27.19 | 48.79 |
| TraesCS3A01G165900.1 | Wheat | extracellular | 26.97 | 48.58 |
| Zm00001d032885_P001 | Maize | plastid | 22.92 | 48.34 |
| Os10t0439100-00 | Rice | extracellular | 27.64 | 48.24 |
| TraesCS3B01G199900.1 | Wheat | extracellular | 27.19 | 48.21 |
| TraesCS3D01G175800.1 | Wheat | extracellular | 27.19 | 48.21 |
| HORVU3Hr1G076670.1 | Barley | extracellular | 26.74 | 47.79 |
| Os05t0276500-01 | Rice | extracellular | 27.19 | 47.45 |
| TraesCS3B01G200100.1 | Wheat | extracellular | 27.19 | 47.45 |
| HORVU3Hr1G076620.1 | Barley | extracellular | 26.52 | 47.39 |
| Os03t0156000-00 | Rice | extracellular | 26.52 | 47.39 |
| TraesCS3A01G317900.1 | Wheat | extracellular | 26.52 | 47.39 |
| TraesCS3B01G347900.1 | Wheat | extracellular | 26.52 | 47.39 |
| Os01t0249100-00 | Rice | extracellular | 23.15 | 47.25 |
| TraesCS3D01G313300.1 | Wheat | extracellular | 25.84 | 47.13 |
| Os01t0248900-01 | Rice | extracellular | 26.52 | 47.01 |
| HORVU3Hr1G076640.2 | Barley | extracellular | 26.29 | 46.99 |
| TraesCS3A01G318000.1 | Wheat | extracellular | 26.29 | 46.99 |
| TraesCS3D01G313100.1 | Wheat | extracellular | 26.29 | 46.99 |
| TraesCS3D01G313400.1 | Wheat | extracellular | 26.29 | 46.99 |
| Os03t0428700-01 | Rice | extracellular | 26.97 | 46.88 |
| Zm00001d035111_P001 | Maize | extracellular | 26.74 | 46.85 |
| TraesCS3A01G165600.1 | Wheat | extracellular | 26.74 | 46.67 |
| TraesCS3D01G176000.1 | Wheat | extracellular | 26.74 | 46.67 |
| PGSC0003DMT400032527 | Potato | extracellular | 21.8 | 46.63 |
| EER91570 | Sorghum | extracellular | 26.29 | 46.61 |
| TraesCS3A01G318100.1 | Wheat | extracellular | 26.07 | 46.59 |
| TraesCS3B01G348000.1 | Wheat | extracellular | 26.07 | 46.59 |
| HORVU5Hr1G119860.2 | Barley | extracellular | 26.52 | 46.46 |
| TraesCS5B01G528500.1 | Wheat | extracellular | 26.52 | 46.46 |
| Os06t0718100-01 | Rice | plastid | 27.42 | 46.39 |
| TraesCS5D01G527700.1 | Wheat | extracellular | 26.52 | 46.27 |
| Os03t0156300-00 | Rice | extracellular | 24.94 | 46.25 |
| TraesCS3D01G313200.1 | Wheat | extracellular | 25.84 | 46.18 |
| TraesCS5B01G528700.1 | Wheat | extracellular | 26.52 | 46.09 |
| TraesCS5D01G527800.1 | Wheat | extracellular | 26.52 | 46.09 |
| Zm00001d035100_P001 | Maize | extracellular | 26.52 | 46.09 |
| TraesCS1A01G406900.1 | Wheat | extracellular | 26.29 | 46.06 |
| TraesCS4A01G345000.1 | Wheat | extracellular | 26.29 | 46.06 |
| Zm00001d035102_P001 | Maize | extracellular | 26.29 | 46.06 |
| Zm00001d035108_P001 | Maize | extracellular | 26.29 | 46.06 |
| TraesCS4B01G272800.1 | Wheat | extracellular | 26.07 | 45.85 |
| TraesCS4D01G271900.1 | Wheat | extracellular | 26.07 | 45.85 |
| TraesCS4B01G271300.1 | Wheat | extracellular | 26.07 | 45.67 |
| Zm00001d032886_P001 | Maize | extracellular | 25.84 | 45.63 |
| TraesCS5B01G548500.1 | Wheat | extracellular | 26.07 | 45.49 |
| TraesCS4D01G271700.1 | Wheat | extracellular | 25.84 | 45.45 |
| HORVU4Hr1G072440.1 | Barley | extracellular | 25.84 | 45.28 |
| TraesCS4D01G270500.1 | Wheat | extracellular | 25.84 | 45.28 |
| Zm00001d035109_P001 | Maize | extracellular | 25.84 | 45.28 |
| HORVU5Hr1G121370.1 | Barley | extracellular | 25.84 | 45.1 |
| TraesCS4A01G339200.1 | Wheat | extracellular | 25.84 | 45.1 |
| TraesCS5D01G535500.1 | Wheat | extracellular | 25.84 | 45.1 |
| EER91571 | Sorghum | extracellular | 25.62 | 45.06 |
| HORVU4Hr1G072660.1 | Barley | extracellular | 25.62 | 45.06 |
| TraesCS4A01G032600.1 | Wheat | extracellular | 25.62 | 45.06 |
| TraesCS4B01G272600.1 | Wheat | extracellular | 25.62 | 45.06 |
| TraesCS4B01G272700.1 | Wheat | extracellular | 25.62 | 45.06 |
| TraesCS4D01G271800.1 | Wheat | extracellular | 25.17 | 44.98 |
| TraesCS1A01G406800.1 | Wheat | extracellular | 25.84 | 44.92 |
| TraesCS4A01G345100.1 | Wheat | extracellular | 22.7 | 44.89 |
| Zm00001d032884_P001 | Maize | extracellular | 25.39 | 44.84 |
| Zm00001d032882_P001 | Maize | extracellular | 25.84 | 44.75 |
| EER94179 | Sorghum | extracellular | 25.39 | 44.66 |
| TraesCS4A01G034200.1 | Wheat | extracellular | 25.39 | 44.49 |
| Zm00001d040249_P001 | Maize | extracellular | 25.17 | 44.44 |
| EES02419 | Sorghum | extracellular | 25.17 | 44.27 |
| Zm00001d035112_P001 | Maize | extracellular | 20.22 | 44.12 |
| EES02683 | Sorghum | extracellular | 25.17 | 44.09 |
| EES13271 | Sorghum | extracellular | 25.62 | 44.02 |
| TraesCS5B01G528600.1 | Wheat | extracellular, plastid, vacuole | 17.08 | 43.68 |
| EES13270 | Sorghum | extracellular | 25.39 | 43.46 |
| KXG38462 | Sorghum | extracellular | 24.49 | 43.08 |
| HORVU3Hr1G034030.1 | Barley | extracellular, plasma membrane, plastid | 27.42 | 42.81 |
| PGSC0003DMT400058522 | Potato | plastid | 23.37 | 42.45 |
| HORVU4Hr1G072580.1 | Barley | extracellular | 25.84 | 41.82 |
| HORVU5Hr1G119670.1 | Barley | extracellular | 26.29 | 41.64 |
| HORVU5Hr1G119680.4 | Barley | extracellular | 26.29 | 41.34 |
| Zm00001d040247_P001 | Maize | extracellular | 26.52 | 41.26 |
| EES14433 | Sorghum | plastid | 25.62 | 41.01 |
| TraesCS3A01G031700.1 | Wheat | extracellular | 18.88 | 40.58 |
| HORVU3Hr1G076630.1 | Barley | extracellular | 20.22 | 40.36 |
| EER94181 | Sorghum | extracellular, plastid, vacuole | 25.62 | 39.18 |
| Zm00001d032883_P001 | Maize | extracellular | 25.62 | 38.91 |
| KXG29998 | Sorghum | extracellular | 15.06 | 35.26 |
| TraesCS5B01G528400.1 | Wheat | extracellular | 13.71 | 35.06 |
| HORVU0Hr1G032890.2 | Barley | extracellular | 15.73 | 34.31 |
| TraesCS3D01G030100.1 | Wheat | extracellular | 14.61 | 31.71 |
| PGSC0003DMT400063359 | Potato | cytosol, plastid, vacuole | 24.49 | 26.59 |
| PGSC0003DMT400063363 | Potato | extracellular | 24.94 | 22.75 |
Protein Annotations
| EntrezGene:102587708 | MapMan:19.2.2.1.5.3.2 | Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | Gene3D:3.30.40.10 |
| InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 | GO:GO:0046872 |
| InterPro:IPR001841 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR013083 | InterPro:IPR036749 | InterPro:IPR036908 |
| UniProt:M1AX89 | PFAM:PF00097 | PFAM:PF01357 | PFAM:PF03330 | EnsemblPlantsGene:PGSC0003DMG400012421 | PGSC:PGSC0003DMG400012421 |
| EnsemblPlants:PGSC0003DMT400032334 | PRINTS:PR01225 | PRINTS:PR01226 | ScanProsite:PS00518 | PFscan:PS50089 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF24 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00184 |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SUPFAM:SSF57850 | UniParc:UPI000296E2AB | InterPro:Znf_C3HC4_RING-type |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : | : |
Description
Alpha-expansin 12 [Source:PGSC_GENE;Acc:PGSC0003DMG400012421]
Coordinates
chr7:+:53266888..53273035
Molecular Weight (calculated)
48545.5 Da
IEP (calculated)
9.328
GRAVY (calculated)
-0.280
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSFVSEEDV SLKKGSAVPV PVPTSSSDNI TGGYDCNICL DSAHDPVVTL CGHLYCWPCI YKWLQVDSST PGSEEKCKCP VCKAHISNSS LVPLYGRGTS
101: STESESKKSQ RDVVVPRRPQ AIEISTLVNS LSPSSHVSQQ LHHRRSVPSA FGSYAALAPS SFGGTPTISL SSPTVGVFGE MFLGRMFGNS DTSLFAYPHP
201: NTSTIPGSGG FRMRQINAQN WLNGRATFYG VNQDPSTFGG ACGYDNPYHA GFGVNTAALS SALFRNGQAC GACYTVRCNR QLDRKWCLPH GAVTVTATNF
301: CPPNNHGGWC DAPRQHFDMS MPAFLRIARQ GNEGVVPILY TRVACKRSGG VRFTLKGQSN FNMVMISNVG GSGDIKSVSI RGSRTKTWLP MYRNWGVNWQ
401: SRNDLRSQTL SFRVTLVDGK TMEFINVVPS AWKFGQTFAS RRQFN
101: STESESKKSQ RDVVVPRRPQ AIEISTLVNS LSPSSHVSQQ LHHRRSVPSA FGSYAALAPS SFGGTPTISL SSPTVGVFGE MFLGRMFGNS DTSLFAYPHP
201: NTSTIPGSGG FRMRQINAQN WLNGRATFYG VNQDPSTFGG ACGYDNPYHA GFGVNTAALS SALFRNGQAC GACYTVRCNR QLDRKWCLPH GAVTVTATNF
301: CPPNNHGGWC DAPRQHFDMS MPAFLRIARQ GNEGVVPILY TRVACKRSGG VRFTLKGQSN FNMVMISNVG GSGDIKSVSI RGSRTKTWLP MYRNWGVNWQ
401: SRNDLRSQTL SFRVTLVDGK TMEFINVVPS AWKFGQTFAS RRQFN
001: MDMKGTYLVT VILLVSTLSV GMCSNGWIRA HATYYGVNDS PASLGGACGY DNPYHAGFGA HTAALSGELF RSGESCGGCY QVRCDFPADP KWCLRGAAVT
101: VTATNFCPTN NNNGWCNLPR HHFDMSSPAF FRIARRGNEG IVPVFYRRVG CKRRGGVRFT MRGQGNFNMV MISNVGGGGS VRSVAVRGSK GKTWLQMTRN
201: WGANWQSSGD LRGQRLSFKV TLTDSKTQTF LNVVPSSWWF GQTFSSRGRQ FV
101: VTATNFCPTN NNNGWCNLPR HHFDMSSPAF FRIARRGNEG IVPVFYRRVG CKRRGGVRFT MRGQGNFNMV MISNVGGGGS VRSVAVRGSK GKTWLQMTRN
201: WGANWQSSGD LRGQRLSFKV TLTDSKTQTF LNVVPSSWWF GQTFSSRGRQ FV
Arabidopsis Description
ATEXPA12Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.