Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032885_P001 | Maize | plastid | 77.69 | 92.42 |
| Zm00001d032884_P001 | Maize | extracellular | 92.43 | 92.06 |
| KXG38462 | Sorghum | extracellular | 82.47 | 81.82 |
| EER94179 | Sorghum | extracellular | 81.67 | 81.03 |
| EER91571 | Sorghum | extracellular | 78.88 | 78.26 |
| EER94181 | Sorghum | extracellular, plastid, vacuole | 88.84 | 76.63 |
| TraesCS1B01G156700.1 | Wheat | extracellular | 70.92 | 70.63 |
| Os03t0428700-01 | Rice | extracellular | 70.12 | 68.75 |
| Os10t0439100-00 | Rice | extracellular | 65.34 | 64.31 |
| EES13271 | Sorghum | extracellular | 65.74 | 63.71 |
| EES13270 | Sorghum | extracellular | 64.54 | 62.31 |
| EES14433 | Sorghum | plastid | 65.74 | 59.35 |
| CDY66063 | Canola | cytosol, extracellular, plastid | 38.25 | 58.18 |
| EES02419 | Sorghum | extracellular | 57.37 | 56.92 |
| EES02683 | Sorghum | extracellular | 56.97 | 56.3 |
| KRH51669 | Soybean | extracellular | 51.79 | 51.59 |
| Bra016473.1-P | Field mustard | extracellular | 34.26 | 50.59 |
| EER94586 | Sorghum | extracellular | 48.61 | 46.21 |
| Solyc07g063210.2.1 | Tomato | extracellular | 46.61 | 45.7 |
| VIT_19s0014g02910.t01 | Wine grape | extracellular | 44.62 | 43.58 |
| KXG29998 | Sorghum | extracellular | 32.27 | 42.63 |
| AT3G15370.2 | Thale cress | extracellular | 46.61 | 41.49 |
| EES14420 | Sorghum | extracellular | 41.43 | 39.1 |
| EER89054 | Sorghum | extracellular | 42.23 | 38.41 |
| KXG32172 | Sorghum | extracellular | 35.46 | 33.58 |
| KXG36242 | Sorghum | extracellular | 36.26 | 33.46 |
| PGSC0003DMT400032334 | Potato | cytosol, nucleus, vacuole | 46.61 | 26.29 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | EntrezGene:8059327 | UniProt:C5X0I3 | EnsemblPlants:EER91570 |
| ProteinID:EER91570 | ProteinID:EER91570.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 |
| PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PFscan:PS51257 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF14 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | EnsemblPlantsGene:SORBI_3001G238300 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A81F61 | RefSeq:XP_002464572.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:+:24476223..24477439
Molecular Weight (calculated)
26613.4 Da
IEP (calculated)
8.531
GRAVY (calculated)
0.005
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MKINKSLVLC LSFSACLALA AAGWSPGTAT FYGGADGSGT MGGACGYDNL YNAGYGVNNA ALSSTLFNDG ASCGQCYLIT CDASRPGGQW CKPGNSITVS
101: ATNLCPANYA LPNGGWCGPG RPHFDMSQPA WERIGIYSAG VIPVLYQQVK CSRTGGVRFG IAGSQYFLLV NIQNLGGSGS VGAAWVKGDR TGWIQMSRNW
201: GANWQALAGL VGQGLSFAVT TTGGQYIQFW NVVPRWWQFG QTYTTTQNFY Y
101: ATNLCPANYA LPNGGWCGPG RPHFDMSQPA WERIGIYSAG VIPVLYQQVK CSRTGGVRFG IAGSQYFLLV NIQNLGGSGS VGAAWVKGDR TGWIQMSRNW
201: GANWQALAGL VGQGLSFAVT TTGGQYIQFW NVVPRWWQFG QTYTTTQNFY Y
001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
Arabidopsis Description
EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.