Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02419 | Sorghum | extracellular | 98.82 | 99.21 |
| Zm00001d040249_P001 | Maize | extracellular | 90.94 | 91.67 |
| Os01t0249100-00 | Rice | extracellular | 63.78 | 74.31 |
| TraesCS3D01G176000.1 | Wheat | extracellular | 71.26 | 70.98 |
| TraesCS3A01G165600.1 | Wheat | extracellular | 71.26 | 70.98 |
| TraesCS3B01G200100.1 | Wheat | extracellular | 70.08 | 69.8 |
| GSMUA_Achr11P... | Banana | extracellular | 61.02 | 62.0 |
| EER91571 | Sorghum | extracellular | 58.66 | 58.89 |
| EER91570 | Sorghum | extracellular | 56.3 | 56.97 |
| EER94179 | Sorghum | extracellular | 54.72 | 54.94 |
| KXG38462 | Sorghum | extracellular | 54.33 | 54.55 |
| EES13271 | Sorghum | extracellular | 52.36 | 51.35 |
| EES13270 | Sorghum | extracellular | 50.79 | 49.62 |
| EER94586 | Sorghum | extracellular | 49.61 | 47.73 |
| EES14433 | Sorghum | plastid | 51.57 | 47.12 |
| EER94181 | Sorghum | extracellular, plastid, vacuole | 53.54 | 46.74 |
| Solyc07g063210.2.1 | Tomato | extracellular | 44.88 | 44.53 |
| VIT_19s0014g02910.t01 | Wine grape | extracellular | 43.7 | 43.19 |
| KXG29998 | Sorghum | extracellular | 31.89 | 42.63 |
| AT3G15370.2 | Thale cress | extracellular | 46.06 | 41.49 |
| EES14420 | Sorghum | extracellular | 42.13 | 40.23 |
| KXG36242 | Sorghum | extracellular | 39.37 | 36.76 |
| EER89054 | Sorghum | extracellular | 39.76 | 36.59 |
| KXG32172 | Sorghum | extracellular | 37.01 | 35.47 |
| PGSC0003DMT400032334 | Potato | cytosol, nucleus, vacuole | 44.09 | 25.17 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | EntrezGene:8072396 | UniProt:C5XFQ8 | EnsemblPlants:EES02683 |
| ProteinID:EES02683 | ProteinID:EES02683.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 |
| PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF15 | InterPro:RlpA-like_DPBB |
| InterPro:RlpA-like_sf | SMART:SM00837 | EnsemblPlantsGene:SORBI_3003G112100 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| UniParc:UPI0001A84E10 | RefSeq:XP_002457563.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:10081930..10084791
Molecular Weight (calculated)
26887.3 Da
IEP (calculated)
4.793
GRAVY (calculated)
-0.069
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMAMLLLYL LSLCASRLGG AVAQQYQYWT PATATFYGGS DASGTMGGSC GYGDLYSAGY GTQTTALSTA LYGDGASCGA CYLVTCDATG TQYCKPGSPS
101: VTVTATNFCP PNYDDANGWC NSPRRHFDMS QPAWETIGVY QAGVIPVNYR RVSCQRSGGI RFAISGHDYF DLVTITNVGG AGAVAAAWIM GTGGTDWLAM
201: SRNWGENWQS GANLTGKALS FKVQTDDGKV VVADNVAPAN WQFGSTYQAS VNFY
101: VTVTATNFCP PNYDDANGWC NSPRRHFDMS QPAWETIGVY QAGVIPVNYR RVSCQRSGGI RFAISGHDYF DLVTITNVGG AGAVAAAWIM GTGGTDWLAM
201: SRNWGENWQS GANLTGKALS FKVQTDDGKV VVADNVAPAN WQFGSTYQAS VNFY
001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
Arabidopsis Description
EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.