CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66063	Canola	cytosol, extracellular, plastid	35.79	41.21
KXG38462	Sorghum	extracellular	45.79	34.39
EER91571	Sorghum	extracellular	45.26	33.99
KRH51669	Soybean	extracellular	44.21	33.33
EER94179	Sorghum	extracellular	43.16	32.41
EES02419	Sorghum	extracellular	43.16	32.41
Bra016473.1-P	Field mustard	extracellular	28.95	32.35
EER91570	Sorghum	extracellular	42.63	32.27
EES02683	Sorghum	extracellular	42.63	31.89
EES13271	Sorghum	extracellular	42.63	31.27
EES13270	Sorghum	extracellular	41.58	30.38
EER94586	Sorghum	extracellular	41.58	29.92
EES14433	Sorghum	plastid	42.63	29.14
VIT_19s0014g02910.t01	Wine grape	extracellular	38.42	28.4
EER94181	Sorghum	extracellular, plastid, vacuole	42.11	27.49
Solyc07g063210.2.1	Tomato	extracellular	35.79	26.56
AT3G15370.2	Thale cress	extracellular	38.42	25.89
EES14420	Sorghum	extracellular	35.26	25.19
EER89054	Sorghum	extracellular	31.58	21.74
KXG32172	Sorghum	extracellular	27.37	19.62
KXG36242	Sorghum	extracellular	26.32	18.38
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	35.26	15.06

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	UniProt:A0A194YP46	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD_sf
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR036749
InterPro:IPR036908	EnsemblPlants:KXG29998	ProteinID:KXG29998	ProteinID:KXG29998.1	PFAM:PF03330	PRINTS:PR01226
PFscan:PS50842	PFscan:PS51257	PANTHER:PTHR31867	PANTHER:PTHR31867:SF19	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	EnsemblPlantsGene:SORBI_3004G121500	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0007F1E904
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:13323718..13324776

Molecular Weight (calculated)

20499.9 Da

IEP (calculated)

9.081

GRAVY (calculated)

0.111

Length

190 amino acids

Sequence
(BLAST)

001: MALARVLAVL LLAVACMLTV AAADDATTRS LSSPAPTGMA HANNATATYG TRTTALSTAL FNGASCEQCY KTACDRKRAN PMFCKPGVTV TITATNLCPP
101: NYALPGNNGG WCNPRPHFDM AQPAWEKTVV YNGGIIQVIY KRCIYIFASL YSSYKNMMHA HSLAYLTGQM LSFRVTNIDG QTIKFTNVVP

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.