Factsheet for Os01t0249100-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
YLoc:	extracellular

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040249_P001	Maize	extracellular	76.15	65.87
EES02419	Sorghum	extracellular	74.77	64.43
EES02683	Sorghum	extracellular	74.31	63.78
TraesCS3D01G176000.1	Wheat	extracellular	72.94	62.35
TraesCS3A01G165600.1	Wheat	extracellular	72.94	62.35
Os01t0248900-01	Rice	extracellular	71.56	62.15
TraesCS3B01G200100.1	Wheat	extracellular	72.48	61.96
Os05t0277000-00	Rice	extracellular	64.68	56.85
Os05t0276500-01	Rice	extracellular	65.14	55.69
GSMUA_Achr11P...	Banana	extracellular	63.76	55.6
Os03t0428700-01	Rice	extracellular	63.76	54.3
Os10t0439100-00	Rice	extracellular	63.3	54.12
Os06t0718100-01	Rice	plastid	62.39	51.71
Os03t0156000-00	Rice	extracellular	56.88	49.8
Os03t0155900-01	Rice	extracellular	56.42	49.4
Os03t0156300-00	Rice	extracellular	53.67	48.75
Os10t0535900-00	Rice	extracellular	51.38	42.11
Solyc07g063210.2.1	Tomato	extracellular	46.33	39.45
VIT_19s0014g02910.t01	Wine grape	extracellular	46.33	39.3
AT3G15370.2	Thale cress	extracellular	48.17	37.23
Os06t0108600-00	Rice	extracellular	40.37	32.84
Os12t0546800-01	Rice	plasma membrane	40.37	30.34
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	47.25	23.15

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A0N7KCN8	ProteinID:BAS71337.1	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	GO:GO:0071555	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	EnsemblPlantsGene:Os01g0249100	EnsemblPlants:Os01t0249100-00	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF15	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000052FA80
SEG:seg	:	:	:	:	:

Description

ALPHA-EXPANSIN 9Similar to Expansin-A9. (Os01t0249100-00)

Coordinates

chr1:-:8202020..8202772

Molecular Weight (calculated)

23015.8 Da

IEP (calculated)

7.858

GRAVY (calculated)

-0.046

Length

218 amino acids

Sequence
(BLAST)

001: LLVVLFLSLC CASRLRGEAA QQWTSATATF YGGSDASGTM GGSCGYGNMY SAGYGTNTTA LSSALYGDGA SCGACYLVTC DASATRWCKN GTSVTVTATN
101: YCPPNYSESG DAGGWCNPPR RHFDMSQPAW EAIAVYSSGI VPVRYARTPC RRVGGIRFGI AGHDYYELVL VTNVAGSGAV AAAWVKGSGT EWLSMSRNWG
201: ENWQSNAYLT GQALSFRV

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.