Factsheet for Os10t0439100-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G156700.1	Wheat	extracellular	77.25	78.17
Os03t0428700-01	Rice	extracellular	77.65	77.34
Os03t0156000-00	Rice	extracellular	69.02	70.68
Os03t0156300-00	Rice	extracellular	65.88	70.0
Os03t0155900-01	Rice	extracellular	68.24	69.88
Zm00001d032886_P001	Maize	extracellular	66.67	67.46
Zm00001d032885_P001	Maize	plastid	54.9	66.35
EER91570	Sorghum	extracellular	64.31	65.34
Zm00001d032884_P001	Maize	extracellular	64.31	65.08
Os01t0248900-01	Rice	extracellular	63.92	64.94
EER94179	Sorghum	extracellular	64.31	64.82
KXG38462	Sorghum	extracellular	64.31	64.82
EER91571	Sorghum	extracellular	63.92	64.43
Zm00001d032882_P001	Maize	extracellular	64.71	64.2
Os01t0249100-00	Rice	extracellular	54.12	63.3
Os05t0276500-01	Rice	extracellular	63.14	63.14
Os06t0718100-01	Rice	plastid	64.71	62.74
CDY66063	Canola	cytosol, extracellular, plastid	39.61	61.21
Os05t0277000-00	Rice	extracellular	58.82	60.48
KRH51669	Soybean	extracellular	55.69	56.35
EER94181	Sorghum	extracellular, plastid, vacuole	63.14	55.33
Zm00001d032883_P001	Maize	extracellular	61.96	53.92
Bra016473.1-P	Field mustard	extracellular	35.29	52.94
Os10t0535900-00	Rice	extracellular	53.73	51.5
Solyc07g063210.2.1	Tomato	extracellular	48.63	48.44
AT3G15370.2	Thale cress	extracellular	51.76	46.81
VIT_19s0014g02910.t01	Wine grape	extracellular	46.67	46.3
Os06t0108600-00	Rice	extracellular	42.35	40.3
Os12t0546800-01	Rice	plasma membrane	38.43	33.79
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	48.24	27.64

Protein Annotations

EntrezGene:107276948	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	ProteinID:AAP53955.1	EMBL:AP008216
ProteinID:BAT11021.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	GO:GO:0071555	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EnsemblPlantsGene:Os10g0439100	EnsemblPlants:Os10t0439100-00	PFAM:PF01357
PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867
PANTHER:PTHR31867:SF14	UniProt:Q7XE35	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0000E26586	RefSeq:XP_015613767.1	SEG:seg	:

Description

EXPA27Similar to cDNA clone:002-180-G03, full insert sequence. (Os10t0439100-00)

Coordinates

chr10:+:15751894..15753575

Molecular Weight (calculated)

27091.2 Da

IEP (calculated)

8.130

GRAVY (calculated)

0.031

Length

255 amino acids

Sequence
(BLAST)

001: MGAMAENLLV LCTILAARMA LAAADDWIPA TATFYGGNDG SGTMGGACGY GNLYDQGYGL ENAALSTALF NDGAACGQCY LIVCDTDKAG RWCKPRGAVT
101: VTATNLCPPN WALPSDGGGW CNPPRRHFDM SQPAWERIGV YRAGIVPVLY RRVRCWRRGG VRFTVGGFDH FELVLVANVA GSGSVAAVSV RGAGTGWLQM
201: SRNWGANWQS LAGLAGQPLS FGVTTTGGQY ILFQDVAPAG WKFGQTFSTS KQFDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.